Factsheet for TraesCS5A01G169300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G166000.1	Wheat	cytosol	98.83	98.83
TraesCS5D01G173700.1	Wheat	cytosol	98.25	98.25
Os09t0251800-01	Rice	cytosol, plasma membrane	81.29	81.29
GSMUA_Achr4P13040_001	Banana	cytosol	71.34	71.34
HORVU5Hr1G052010.2	Barley	cytosol	90.06	68.14
Zm00001d019836_P003	Maize	cytosol	73.68	67.02
HORVU5Hr1G052030.1	Barley	cytosol	90.06	64.17
GSMUA_Achr2P05420_001	Banana	cytosol	55.56	62.91
KRH25661	Soybean	cytosol	22.81	59.09
VIT_00s0531g00030.t01	Wine grape	cytosol	54.97	56.97
KRH11612	Soybean	cytosol	53.8	55.42
KRH36617	Soybean	cytosol	53.22	54.82
KRH51202	Soybean	cytosol	52.05	53.61
PGSC0003DMT400038836	Potato	cytosol	52.05	52.66
AT5G47710.1	Thale cress	cytosol	50.88	52.41
PGSC0003DMT400034618	Potato	cytosol	51.46	52.38
Solyc04g015070.2.1	Tomato	cytosol	51.46	52.07
TraesCS2A01G261500.1	Wheat	cytosol	41.52	44.1
CDY40545	Canola	endoplasmic reticulum, extracellular	50.88	43.94
TraesCS2A01G501300.1	Wheat	mitochondrion	39.77	40.0
TraesCS2A01G261400.1	Wheat	cytosol	35.09	35.29
TraesCS6A01G394700.1	Wheat	cytosol, endoplasmic reticulum	33.33	34.13
TraesCS2A01G229100.1	Wheat	cytosol	33.33	33.93
TraesCS5A01G546300.1	Wheat	cytosol	32.75	33.33
TraesCS2A01G229200.1	Wheat	endoplasmic reticulum, extracellular	31.58	32.53
TraesCS6A01G160700.1	Wheat	cytosol	38.01	20.12
TraesCS6A01G285400.2	Wheat	golgi	38.6	19.88
TraesCS1A01G239200.1	Wheat	cytosol	35.67	16.27

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0016020	InterPro:IPR000008
InterPro:IPR035892	PFAM:PF00168	PRINTS:PR00360	PFscan:PS50004	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245
SMART:SM00239	SUPFAM:SSF49562	EnsemblPlantsGene:TraesCS5A01G169300	EnsemblPlants:TraesCS5A01G169300.1	TIGR:cd04038	SEG:seg

Description

No Description!

Coordinates

chr5A:+:361709223..361712000

Molecular Weight (calculated)

19016.9 Da

IEP (calculated)

7.263

GRAVY (calculated)

-0.137

Length

171 amino acids

Sequence
(BLAST)

001: MNEEAEGRGA RPGVLKVVVA QGTNLAIRDF TSSDPYVVVR LADKSAKTKV INSCLNPVWN EEMVFSIREP LGIIKLEVFD RDRFKYDDKM GHAFIDLQPV
101: AAATKLRRAL KLTTGETRLR KVAPTADNCL LSDSFVTYAD GEIVLDSRLR LRDVESGELF VTVKWIDAGA T

Best Arabidopsis Sequence Match ( AT5G47710.4 )
(BLAST)

001: MGEPLGLLQV TVIQGKKLVI RDFKSSDPYV IVKLGNESAK TKVINNCLNP VWNEELNFTL KDPAAVLALE VFDKDRFKAD DKMGHASLSL QPLISVARLR
101: HVVRVSSGET TLRKVLPDPE NCVSRESTIS CIDGEVVQSV WLRLCAVESG EIELKIKLID PPGTNK

Arabidopsis Description

CAR11Protein C2-DOMAIN ABA-RELATED 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.