Factsheet for Os09t0251800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G166000.1	Wheat	cytosol	82.46	82.46
TraesCS5D01G173700.1	Wheat	cytosol	81.29	81.29
TraesCS5A01G169300.1	Wheat	cytosol	81.29	81.29
GSMUA_Achr4P13040_001	Banana	cytosol	69.59	69.59
Zm00001d019836_P003	Maize	cytosol	73.1	66.49
GSMUA_Achr2P05420_001	Banana	cytosol	52.05	58.94
HORVU5Hr1G052010.2	Barley	cytosol	77.78	58.85
VIT_00s0531g00030.t01	Wine grape	cytosol	54.39	56.36
HORVU5Hr1G052030.1	Barley	cytosol	77.78	55.42
KRH25661	Soybean	cytosol	21.05	54.55
KRH11612	Soybean	cytosol	52.63	54.22
KRH36617	Soybean	cytosol	52.05	53.61
PGSC0003DMT400038836	Potato	cytosol	52.63	53.25
PGSC0003DMT400034618	Potato	cytosol	51.46	52.38
Solyc04g015070.2.1	Tomato	cytosol	51.46	52.07
AT5G47710.1	Thale cress	cytosol	50.29	51.81
KRH51202	Soybean	cytosol	49.71	51.2
CDY40545	Canola	endoplasmic reticulum, extracellular	50.88	43.94
Os02t0327000-01	Rice	cytosol	39.18	40.61
Os06t0609450-01	Rice	cytosol	30.99	38.41
Os07t0108400-01	Rice	cytosol	37.43	36.78
Os07t0501700-01	Rice	cytosol, mitochondrion	32.75	33.73
Os07t0500300-01	Rice	extracellular	32.75	32.37
Os07t0462500-00	Rice	cytosol	33.33	30.81
Os02t0198300-02	Rice	plasma membrane	38.6	20.62
Os02t0722500-01	Rice	cytosol	36.26	18.67
Os05t0382000-01	Rice	cytosol	39.77	17.22
Os01t0951100-01	Rice	cytosol	37.43	16.8
Os07t0108500-01	Rice	mitochondrion	11.11	10.38

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EntrezGene:4346518	EMBL:AK061218	EMBL:AK104010	ProteinID:BAD22329.1
ProteinID:BAD22493.1	ProteinID:BAF24597.1	ProteinID:BAT07054.1	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:EAZ43916.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886
GO:GO:0016020	InterPro:IPR000008	InterPro:IPR035892	EnsemblPlantsGene:Os09g0251800	EnsemblPlants:Os09t0251800-01	PFAM:PF00168
PRINTS:PR00360	PFscan:PS50004	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245	UniProt:Q6K295	SMART:SM00239
SUPFAM:SSF49562	UniParc:UPI0000377E3A	RefSeq:XP_015651236.1	SEG:seg	:	:

Description

C2 calcium-dependent membrane targeting domain containing protein. (Os09t0251800-01)

Coordinates

chr9:+:3949859..3953247

Molecular Weight (calculated)

19222.1 Da

IEP (calculated)

5.409

GRAVY (calculated)

-0.120

Length

171 amino acids

Sequence
(BLAST)

001: MEEEEAGVRE RRGVLKVVVA SGTNLAVRDF TSSDPYVVVR LAAMNKKTKV INSCLNPVWN EEMSFSIEEP AGVIKFEVFD WDRFKYDDKM GHAFLELQPV
101: AAAAKLRRAL RLTTGETKLR KVAASVDNCL MCDSFVTYAD GEIVLDARLR LRDVESGELF VTVKWIDANA K

Best Arabidopsis Sequence Match ( AT5G47710.4 )
(BLAST)

001: MGEPLGLLQV TVIQGKKLVI RDFKSSDPYV IVKLGNESAK TKVINNCLNP VWNEELNFTL KDPAAVLALE VFDKDRFKAD DKMGHASLSL QPLISVARLR
101: HVVRVSSGET TLRKVLPDPE NCVSRESTIS CIDGEVVQSV WLRLCAVESG EIELKIKLID PPGTNK

Arabidopsis Description

CAR11Protein C2-DOMAIN ABA-RELATED 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.