Factsheet for Os01t0951100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16180_001	Banana	cytosol	60.63	62.94
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	56.17	61.67
TraesCS3B01G548000.1	Wheat	cytosol	75.33	60.29
HORVU3Hr1G108480.1	Barley	cytosol	75.33	59.79
CDY69110	Canola	cytosol	14.7	59.57
TraesCS3D01G494100.1	Wheat	cytosol	74.54	58.08
Os05t0382000-01	Rice	cytosol	59.32	57.22
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	49.08	55.82
KRH13401	Soybean	cytosol	53.54	55.43
AT3G07940.1	Thale cress	cytosol	55.91	55.32
KRH20756	Soybean	cytosol	53.28	55.16
KRH30029	Soybean	cytosol	56.43	54.99
Solyc08g043140.2.1	Tomato	cytosol	56.96	54.94
PGSC0003DMT400068533	Potato	cytosol	56.69	54.68
CDY22145	Canola	cytosol	54.86	54.57
VIT_13s0019g00350.t01	Wine grape	cytosol	55.38	53.28
Os06t0609450-01	Rice	cytosol	19.16	52.9
CDX74022	Canola	cytosol	53.28	52.86
Bra001277.1-P	Field mustard	cytosol	53.02	52.6
CDY28007	Canola	cytosol	54.59	51.23
CDY35974	Canola	cytosol	54.33	50.99
Bra029688.1-P	Field mustard	cytosol	54.33	50.99
KRH62915	Soybean	cytosol	45.14	49.0
Os02t0198300-02	Rice	plasma membrane	38.58	45.94
Os02t0327000-01	Rice	cytosol	19.68	45.45
Os02t0722500-01	Rice	cytosol	37.8	43.37
Os09t0251800-01	Rice	cytosol, plasma membrane	16.8	37.43
Os07t0108400-01	Rice	cytosol	17.06	37.36
Os07t0501700-01	Rice	cytosol, mitochondrion	16.27	37.35
Os07t0500300-01	Rice	extracellular	16.27	35.84
Os07t0462500-00	Rice	cytosol	17.06	35.14
Zm00001d011855_P002	Maize	cytosol	77.95	28.26
Os07t0108500-01	Rice	mitochondrion	6.04	12.57

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	EntrezGene:4325738	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	ProteinID:BAB86206.1	ProteinID:BAF07325.1	ProteinID:BAS76242.1	InterPro:C2_dom	InterPro:C2_domain_sf
ProteinID:EAZ14845.1	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508
EnsemblPlantsGene:Os01g0951100	EnsemblPlants:Os01t0951100-01	PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF312	UniProt:Q8RZA2	SMART:SM00105	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI00000A06E7	RefSeq:XP_015628511.1	SEG:seg	:

Description

Arf GTPase activating protein family protein. (Os01t0951100-01)

Coordinates

chr1:+:41882560..41886264

Molecular Weight (calculated)

42709.1 Da

IEP (calculated)

8.399

GRAVY (calculated)

-0.471

Length

381 amino acids

Sequence
(BLAST)

001: MEGHKPVHQF VDSPKPQRSA RRICGMASRI DANDHGNQQG GNPQGPVGTA ERLEHLLNQP ANKICADCGA PDPKWVSLTF GVFICIKCSG AHRSLGVHIS
101: KVVSVKLDEW TDEQVDILAD SGGNAAVNMI YEAFIPENYM KPRQDCSSEG RNDFVRRKYE LQQFLSNTQL TCYSQKSGKN HNRVQHSSSN RHGLGHAFRN
201: SWRRKEHESK SVKKTVEIGM VEFVGLIKVN VIRGTNLAVR DMMSSDPYVI LNLGHQSMKT KVIKSSLNPV WNERILLSIP DPIPMLKLQV YDKDTFTTDD
301: RMGEAEINIQ PLVAAAKAYE TSVVADTAQL NRWLAKEGIW IQKDSAISII DGKVKQEVTV RLQNVERGHL EMELECVPLT Q

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.