Factsheet for HORVU3Hr1G108480.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G548000.1	Wheat	cytosol	89.58	90.34
TraesCS3D01G494100.1	Wheat	cytosol	90.83	89.16
Os01t0951100-01	Rice	cytosol	59.79	75.33
CDY69110	Canola	cytosol	12.08	61.7
GSMUA_Achr5P16180_001	Banana	cytosol	46.46	60.76
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	42.92	59.37
AT3G07940.1	Thale cress	cytosol	44.17	55.06
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	38.33	54.93
KRH30029	Soybean	cytosol	44.58	54.73
KRH20756	Soybean	cytosol	41.67	54.35
KRH13401	Soybean	cytosol	41.46	54.08
CDY22145	Canola	cytosol	42.92	53.79
CDX74022	Canola	cytosol	42.29	52.86
HORVU1Hr1G057260.3	Barley	cytosol	45.0	52.81
Solyc08g043140.2.1	Tomato	cytosol	43.33	52.66
Bra001277.1-P	Field mustard	cytosol	42.08	52.6
PGSC0003DMT400068533	Potato	cytosol	43.12	52.41
VIT_13s0019g00350.t01	Wine grape	cytosol	42.5	51.52
CDY35974	Canola	cytosol	42.29	50.0
CDY28007	Canola	cytosol	42.29	50.0
Bra029688.1-P	Field mustard	cytosol	42.29	50.0
KRH62915	Soybean	cytosol	35.62	48.72
HORVU6Hr1G032940.1	Barley	cytosol	28.96	43.03
HORVU0Hr1G039050.2	Barley	mitochondrion	14.38	40.83
HORVU6Hr1G091350.3	Barley	cytosol, endoplasmic reticulum	13.12	37.95
HORVU6Hr1G091440.1	Barley	cytosol, endoplasmic reticulum	13.12	37.95
HORVU2Hr1G063790.1	Barley	cytosol	11.67	32.94
HORVU6Hr1G071850.3	Barley	mitochondrion	27.29	29.71
Zm00001d011855_P002	Maize	cytosol	63.54	29.02
HORVU5Hr1G052010.2	Barley	cytosol	12.71	26.99
HORVU5Hr1G052030.1	Barley	cytosol	12.92	25.83
HORVU2Hr1G048940.1	Barley	cytosol, plastid	5.0	17.52

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	UniProt:A0A287MM20	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:HORVU3Hr1G108480	EnsemblPlants:HORVU3Hr1G108480.1
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF312	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI000B463AE9	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:675163352..675167645

Molecular Weight (calculated)

52172.7 Da

IEP (calculated)

9.083

GRAVY (calculated)

-0.634

Length

480 amino acids

Sequence
(BLAST)

001: MEGQKHHADS QKPSHNRRKP GGTSAKMATG GDQASPPRAK AGAGGDQASP PGARAGTCGD LPNLPCPKPA ASGDQATSPG AKMRPGDQAT SPGAKMRAGD
101: QASPPSTKLR AGDQASPPSV KMRASDQASP PSTKLRAGDQ THQPGLIATT ERLDRLLSQP ANKCCADCGA PDPKWVSLTF GAFICIKCSG AHRSLGVHIS
201: KVVSVKLDEW TDEQVDFLTD SGGNGAVNTT YEAFLGNYTK PRQDCSADDR NDFIRRKYEF QQFLSNQQLS CSSQNNGKHY YQQQHGSSNR HGLGHAFRNS
301: WRRKDDKALK KPAAVEVGMV EFVGLIKVNI IRGTNLAIRD VMSSDPYVIL NLGHQSMKTK VIKSSLNPVW NERLLLSIPD PVPLLKVQVY DKDTFTTDDR
401: MGEAEINIQP LVAAARAYET KSITDTAELN KWMAKDGIWI PRDSAITIID NKVKQEVTVR LQNVERGHLE MELECVPLTQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.