Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35974 | Canola | cytosol | 97.29 | 97.29 |
| AT3G07940.1 | Thale cress | cytosol | 84.24 | 88.83 |
| CDY22145 | Canola | cytosol | 83.0 | 87.99 |
| CDX74022 | Canola | cytosol | 79.56 | 84.11 |
| CDY69110 | Canola | cytosol | 17.24 | 74.47 |
| KRH30029 | Soybean | cytosol | 63.3 | 65.73 |
| KRH20756 | Soybean | cytosol | 58.37 | 64.4 |
| KRH13401 | Soybean | cytosol | 58.37 | 64.4 |
| VIT_13s0019g00350.t01 | Wine grape | cytosol | 60.34 | 61.87 |
| Solyc08g043140.2.1 | Tomato | cytosol | 59.85 | 61.52 |
| PGSC0003DMT400068533 | Potato | cytosol | 59.61 | 61.27 |
| GSMUA_Achr5P16180_001 | Banana | cytosol | 54.93 | 60.76 |
| GSMUA_Achr8P09660_001 | Banana | cytosol, plastid | 50.99 | 59.65 |
| KRH62915 | Soybean | cytosol | 48.77 | 56.41 |
| TraesCS1B01G251400.1 | Wheat | cytosol | 33.5 | 55.06 |
| Os01t0951100-01 | Rice | cytosol | 51.23 | 54.59 |
| TraesCS1A01G239200.1 | Wheat | cytosol | 48.77 | 52.8 |
| TraesCS1D01G239400.3 | Wheat | cytosol | 48.77 | 52.38 |
| EES18146 | Sorghum | cytosol | 49.26 | 51.95 |
| Zm00001d038063_P001 | Maize | nucleus | 48.28 | 50.91 |
| Os05t0382000-01 | Rice | cytosol | 49.01 | 50.38 |
| CDX76421 | Canola | cytosol | 39.9 | 49.24 |
| CDX82807 | Canola | cytosol | 38.18 | 49.05 |
| CDY21329 | Canola | mitochondrion | 40.64 | 48.96 |
| CDY62002 | Canola | mitochondrion | 40.39 | 48.66 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 39.9 | 47.93 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 40.64 | 47.83 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 39.66 | 47.35 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 39.41 | 47.34 |
| HORVU1Hr1G057260.3 | Barley | cytosol | 47.29 | 46.94 |
| CDY65341 | Canola | plastid | 40.15 | 43.94 |
| TraesCS3B01G548000.1 | Wheat | cytosol | 49.75 | 42.44 |
| HORVU3Hr1G108480.1 | Barley | cytosol | 50.0 | 42.29 |
| TraesCS3D01G494100.1 | Wheat | cytosol | 49.01 | 40.7 |
| CDY16452 | Canola | mitochondrion | 17.0 | 40.59 |
| CDY47746 | Canola | mitochondrion | 16.75 | 40.48 |
| CDX82060 | Canola | mitochondrion | 16.75 | 40.48 |
| CDY01709 | Canola | mitochondrion | 16.75 | 40.48 |
| CDY27005 | Canola | cytosol | 16.75 | 40.48 |
| CDY38572 | Canola | mitochondrion | 16.75 | 40.48 |
| CDX77307 | Canola | mitochondrion | 16.75 | 40.0 |
| CDY11543 | Canola | cytosol | 16.26 | 40.0 |
| CDX96279 | Canola | cytosol | 16.26 | 40.0 |
| CDY11544 | Canola | cytosol | 17.73 | 38.92 |
| CDY07499 | Canola | cytosol | 16.75 | 38.86 |
| CDX96152 | Canola | cytosol | 16.75 | 38.86 |
| CDY71117 | Canola | cytosol | 15.27 | 38.75 |
| CDX99693 | Canola | cytosol | 16.01 | 38.69 |
| CDX96278 | Canola | cytosol | 17.49 | 38.38 |
| CDX74562 | Canola | cytosol | 15.76 | 38.32 |
| CDY23479 | Canola | cytosol | 17.24 | 37.84 |
| CDY04742 | Canola | cytosol | 14.78 | 37.5 |
| CDY71433 | Canola | cytosol | 14.78 | 37.5 |
| CDY70365 | Canola | cytosol | 16.5 | 37.22 |
| CDX74561 | Canola | mitochondrion | 15.27 | 36.9 |
| CDY27654 | Canola | cytosol | 16.26 | 36.87 |
| CDX75953 | Canola | cytosol | 16.01 | 36.72 |
| CDY51927 | Canola | cytosol | 16.01 | 36.72 |
| CDY04090 | Canola | cytosol | 16.26 | 36.67 |
| CDY48816 | Canola | cytosol | 15.52 | 35.0 |
| CDY09436 | Canola | cytosol | 15.52 | 35.0 |
| CDY58016 | Canola | cytosol | 15.27 | 34.44 |
| CDY17665 | Canola | cytosol | 15.02 | 33.89 |
| CDY40545 | Canola | endoplasmic reticulum, extracellular | 15.27 | 31.31 |
| CDY70119 | Canola | cytosol | 19.21 | 30.83 |
| CDY60369 | Canola | cytosol | 12.07 | 26.34 |
| CDY49631 | Canola | extracellular | 7.64 | 25.83 |
| CDY23477 | Canola | cytosol | 7.88 | 25.6 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 38.18 | 21.99 |
| CDY01706 | Canola | golgi, mitochondrion, plasma membrane, plastid | 12.56 | 21.61 |
| Zm00001d011855_P002 | Maize | cytosol | 49.01 | 18.93 |
| CDX68329 | Canola | cytosol | 6.4 | 18.84 |
| CDY23476 | Canola | cytosol | 0.49 | 1.69 |
Protein Annotations
| Gene3D:2.60.40.150 | Gene3D:3.30.40.160 | MapMan:35.1 | GO:A0A078GS85 | UniProt:A0A078GS85 | InterPro:ARFGAP/RecO |
| InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf | InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDY28007 | ProteinID:CDY28007 |
| ProteinID:CDY28007.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 |
| GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00038933001 | InterPro:IPR000008 | InterPro:IPR001164 | InterPro:IPR035892 |
| InterPro:IPR038508 | PFAM:PF00168 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50004 | PFscan:PS50115 |
| PANTHER:PTHR23180 | PANTHER:PTHR23180:SF390 | SMART:SM00105 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF57863 |
| UniParc:UPI0004EEDBC6 | : | : | : | : | : |
Description
BnaC05g44090DBnaC05g44090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS85]
Coordinates
chrLK032213:-:179281..181752
Molecular Weight (calculated)
45228.0 Da
IEP (calculated)
6.183
GRAVY (calculated)
-0.392
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQFFSEHLS CSRCLGSSLE MSLGQANVNP LEVSSGSHAC LYDLLCSETP RGTLQKDFQT STSDPRDRLE KLLKQPGNKY CADCGSPEPK WVSLSLGVFI
101: CIKCSGVHRS LGVHISKVFS INLDEWTDEQ VDMLVGYGGN NAVNQRFEAC NMDQLKKPKA DSNNEERSDF IRKKYELHQF MDPQDGALCT YEQPTIINNS
201: LPSLCSASAS HRSAKNRIGQ AFRNSWGRRE SDHKCPKKSN SMAGMVEFVG LIRVNVVKGT NLAVRDVMTS DPYVILSLGQ QSVKTRVIKN NLNPVWNETL
301: MLSIPEQMPP LKVLVYDKDT FTTDDFMGEA EIDIQPLVSA AKAYETSSIK EPMQLGSWVA SKENTLVSDG IISQEEGKVK QDISLRLQKV ERGVLEIQLE
401: CLPLTQ
101: CIKCSGVHRS LGVHISKVFS INLDEWTDEQ VDMLVGYGGN NAVNQRFEAC NMDQLKKPKA DSNNEERSDF IRKKYELHQF MDPQDGALCT YEQPTIINNS
201: LPSLCSASAS HRSAKNRIGQ AFRNSWGRRE SDHKCPKKSN SMAGMVEFVG LIRVNVVKGT NLAVRDVMTS DPYVILSLGQ QSVKTRVIKN NLNPVWNETL
301: MLSIPEQMPP LKVLVYDKDT FTTDDFMGEA EIDIQPLVSA AKAYETSSIK EPMQLGSWVA SKENTLVSDG IISQEEGKVK QDISLRLQKV ERGVLEIQLE
401: CLPLTQ
001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
Arabidopsis Description
AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.