Factsheet for Zm00001d038063_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18146	Sorghum	cytosol	92.73	92.73
TraesCS1A01G239200.1	Wheat	cytosol	72.73	74.67
TraesCS1D01G239400.3	Wheat	cytosol	72.21	73.55
Os05t0382000-01	Rice	cytosol	74.03	72.15
TraesCS1B01G251400.1	Wheat	cytosol	45.97	71.66
HORVU1Hr1G057260.3	Barley	cytosol	70.13	66.01
CDY69110	Canola	cytosol	14.55	59.57
GSMUA_Achr5P16180_001	Banana	cytosol	56.36	59.13
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	52.21	57.93
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	47.53	54.63
KRH30029	Soybean	cytosol	55.06	54.22
CDY22145	Canola	cytosol	52.99	53.26
KRH13401	Soybean	cytosol	50.65	52.99
KRH20756	Soybean	cytosol	50.39	52.72
VIT_13s0019g00350.t01	Wine grape	cytosol	54.03	52.53
AT3G07940.1	Thale cress	cytosol	52.47	52.47
CDX74022	Canola	cytosol	50.91	51.04
Bra001277.1-P	Field mustard	cytosol	50.65	50.78
Solyc08g043140.2.1	Tomato	cytosol	51.95	50.63
PGSC0003DMT400068533	Potato	cytosol	51.95	50.63
KRH62915	Soybean	cytosol	45.19	49.57
CDY28007	Canola	cytosol	50.91	48.28
CDY35974	Canola	cytosol	50.39	47.78
Bra029688.1-P	Field mustard	cytosol	50.13	47.54
Zm00001d015804_P005	Maize	cytosol, mitochondrion	39.48	47.2
Zm00001d017881_P001	Maize	cytosol	37.14	43.07
Zm00001d011396_P001	Maize	cytosol	19.22	42.05
Zm00001d034981_P001	Maize	cytosol	20.78	41.88
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	33.77	38.24
Zm00001d044179_P001	Maize	cytosol	19.22	36.82
Zm00001d006447_P001	Maize	mitochondrion	15.06	34.94
Zm00001d019836_P003	Maize	cytosol	16.62	34.04
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	12.73	32.24
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	15.84	28.11
Zm00001d036830_P005	Maize	plastid	42.6	27.84
Zm00001d005398_P001	Maize	cytosol	25.71	27.5
Zm00001d007340_P001	Maize	cytosol	24.42	25.34
Zm00001d011855_P002	Maize	cytosol	58.44	21.41

Protein Annotations

EntrezGene:100216740	Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	ProteinID:AQK85541.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	UniProt:B4FDU5	EMBL:BT035283	InterPro:C2_dom	InterPro:C2_domain_sf
GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF390
SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI00017B65F0	EnsemblPlantsGene:Zm00001d038063
EnsemblPlants:Zm00001d038063_P001	EnsemblPlants:Zm00001d038063_T001	SEG:seg	:	:	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD11

Coordinates

chr6:+:146680443..146684009

Molecular Weight (calculated)

43400.2 Da

IEP (calculated)

5.915

GRAVY (calculated)

-0.598

Length

385 amino acids

Sequence
(BLAST)

001: MERQGMEGNN LLHFLDTPSA HYRRTCDGFE AQHGGDEHSE TSDTDPANAR EMLEYLLNQP ANKICADCGS PDPKWVALPF GTFICIKCSG THRSLGVHIS
101: KVISVNLDEW TDDEVNCLAE SGGNSVVNSR YEAFLPENKK LKQDCSTEER NDFIRKKYQF QQFVCDPQFS CPLPLNRKHA PPDKNHQQHN SSKYGFGHTF
201: RNSWRKKDSD SKSLKKMSDV GMIEFVGLVK VNIVKGTDLA VRDVMSSDPY VLIHLGHQSM KTKVIKNTLN PIWNERLMLS IPDPIPPLKL QVFDKDTFSS
301: DDRMGEAEVD IRPLIAATKE HENSTITEST ELYRWSASED SNGVLAKDSV ISVASGKVKQ EITLRLQNVE RGEVEIEIEC VPLSQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.