Factsheet for Zm00001d017881_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05611	Sorghum	cytosol	96.69	96.69
Zm00001d034981_P001	Maize	cytosol	52.11	90.58
Os02t0722500-01	Rice	cytosol	87.35	87.35
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	84.94	82.94
TraesCS6A01G285400.2	Wheat	golgi	82.53	82.53
GSMUA_Achr9P12760_001	Banana	cytosol	67.17	67.78
GSMUA_Achr9P27900_001	Banana	cytosol	68.98	65.99
Zm00001d015804_P005	Maize	cytosol, mitochondrion	61.45	63.35
HORVU6Hr1G071850.3	Barley	mitochondrion	83.13	62.59
TraesCS6D01G265900.2	Wheat	cytosol	82.53	62.56
Zm00001d005398_P001	Maize	cytosol	67.77	62.5
TraesCS6B01G314300.1	Wheat	cytosol	79.82	59.28
Zm00001d007340_P001	Maize	cytosol	65.36	58.49
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	18.07	39.47
Zm00001d038063_P001	Maize	nucleus	43.07	37.14
Zm00001d011396_P001	Maize	cytosol	19.28	36.36
Zm00001d006447_P001	Maize	mitochondrion	18.07	36.14
Zm00001d036830_P005	Maize	plastid	61.14	34.47
Zm00001d044179_P001	Maize	cytosol	19.58	32.34
Zm00001d019836_P003	Maize	cytosol	18.07	31.91
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	16.87	25.81
Zm00001d011855_P002	Maize	cytosol	43.67	13.8

Protein Annotations

EntrezGene:100273517	Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	ProteinID:AQK74401.1	ProteinID:AQK74406.1
InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	UniProt:B6TSD4	InterPro:C2_dom	InterPro:C2_domain_sf
EMBL:EU967899	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508
PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180
PANTHER:PTHR23180:SF291	SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI000182D7FB
EnsemblPlantsGene:Zm00001d017881	EnsemblPlants:Zm00001d017881_P001	EnsemblPlants:Zm00001d017881_T001	SEG:seg	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD12

Coordinates

chr5:-:209502895..209507276

Molecular Weight (calculated)

37044.3 Da

IEP (calculated)

6.377

GRAVY (calculated)

-0.347

Length

332 amino acids

Sequence
(BLAST)

001: MSTANRYQHI KSTKPVVGKA RKLKDLMIKS DNRICADCGA PDPKWASANI GVFLCLKCGD VHRALGPDIS KVLSVTLDDW SDSDIDSMVE VGGNSYANSI
101: YEAFLPKDHP KPKPDSTMEY RTKFIRAKYE TQDFLKPSLR ISSRSSFKST TSVKSVDSNF SSTSRKDVFE DTREFVGELN ITLVKGTNLA VRDMLTSDPY
201: VVLTLGGQKV QSTVKKSDLN PVWNEVLKIS VPRNYGPLKL EVYDHDMFSA DDIMGEAEID LQPMITAAMA FGDTSRLGDM QIGRWFMTKD NALMKDSTVN
301: VVAGKVKQEV HLKLQNVESG ELELELEWVP IL

Best Arabidopsis Sequence Match ( AT4G05330.3 )
(BLAST)

001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.