Factsheet for Zm00001d005398_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034981_P001	Maize	cytosol	49.44	93.19
Zm00001d007340_P001	Maize	cytosol	80.0	77.63
Zm00001d017881_P001	Maize	cytosol	62.5	67.77
KRH71995	Soybean	cytosol	17.5	57.8
GSMUA_Achr7P20210_001	Banana	cytosol	35.56	56.89
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	50.28	53.24
VIT_10s0003g04900.t01	Wine grape	cytosol	40.83	44.55
Zm00001d015804_P005	Maize	cytosol, mitochondrion	39.44	44.1
KRH11784	Soybean	cytosol	38.89	43.21
CDX82807	Canola	cytosol	37.78	43.04
KRH36796	Soybean	cytosol	38.61	42.9
CDX76421	Canola	cytosol	39.17	42.86
CDX94026	Canola	cytosol, mitochondrion, nucleus	40.0	42.6
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	39.72	42.43
Bra029572.1-P	Field mustard	cytosol	32.22	42.03
CDY58481	Canola	cytosol, mitochondrion, nucleus	39.44	42.01
Bra038783.1-P	Field mustard	cytosol	39.44	42.01
CDY62002	Canola	mitochondrion	38.89	41.54
CDY21329	Canola	mitochondrion	38.89	41.54
KRH59111	Soybean	cytosol	37.78	41.46
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	38.06	41.39
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	38.61	41.37
CDY46364	Canola	cytosol, mitochondrion, nucleus	38.61	40.29
KRH42994	Soybean	cytosol	36.67	40.24
CDY39164	Canola	cytosol, mitochondrion, nucleus	37.78	40.0
CDY65341	Canola	plastid	39.44	38.27
CDY60369	Canola	cytosol	16.67	32.26
Bra013508.1-P	Field mustard	cytosol	34.44	31.55
Bra024773.1-P	Field mustard	cytosol	24.44	30.34
Zm00001d038063_P001	Maize	nucleus	27.5	25.71
Zm00001d036830_P005	Maize	plastid	37.78	23.09
Zm00001d006447_P001	Maize	mitochondrion	10.0	21.69
Zm00001d011396_P001	Maize	cytosol	9.44	19.32
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	37.22	19.01
Zm00001d044179_P001	Maize	cytosol	10.56	18.91
Zm00001d019836_P003	Maize	cytosol	8.89	17.02
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	6.94	16.45
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	9.17	15.21
Zm00001d011855_P002	Maize	cytosol	27.5	9.42

Protein Annotations

MapMan:22.3.4.3	Gene3D:3.30.40.160	Gene3D:3.40.50.300	UniProt:A0A1D6EMB9	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	InterPro:Gpn	InterPro:IPR001164	InterPro:IPR038508	ProteinID:ONM21015.1
InterPro:P-loop_NTPase	PFAM:PF01412	PFAM:PF03029	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180
PANTHER:PTHR23180:SF291	SMART:SM00105	SUPFAM:SSF49562	SUPFAM:SSF52540	SUPFAM:SSF57863	UniParc:UPI00084313CB
EnsemblPlantsGene:Zm00001d005398	EnsemblPlants:Zm00001d005398_P001	EnsemblPlants:Zm00001d005398_T001	SEG:seg	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD12

Coordinates

chr2:+:172424708..172428645

Molecular Weight (calculated)

40735.2 Da

IEP (calculated)

4.983

GRAVY (calculated)

-0.403

Length

360 amino acids

Sequence
(BLAST)

001: MSTANRYQHI KSTKPVVGKA RKLKDLMIKS DNRICADCGA PDPKWASANI GVFLCLKCGD VHKALGPDIS KVLSVTLDDW SDSDIDSMVE VGGNSHANSI
101: YEAFLPKDRP KPKPDSTMEY RTKFIRAKYE TQDFLKPSLR ISSRSSFKST TSVKSVDSNF SSTSRKDVSE DTREFVGELN ITLVKGTNLA VRDMLTSDPY
201: VVLTLGGQFC SKNSTIGSNC IKLNRRHLED SLDDWFDEQL ENYLDDDYLV FDCPGQIELF THVPVLRNFV EHLKRKIFNV CAVYLLDSQL ELPHINILSK
301: MDLVSNKKDV EVDDYSMVSF IPLDLRKESS IQYVLSSIDT CIQYGEDADV KVRDFEEDED

Best Arabidopsis Sequence Match ( AT4G05330.3 )
(BLAST)

001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [cytosol,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.