Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71995 | Soybean | cytosol | 32.98 | 57.8 |
| Zm00001d017881_P001 | Maize | cytosol | 90.58 | 52.11 |
| GSMUA_Achr7P20210_001 | Banana | cytosol | 60.21 | 51.11 |
| Zm00001d005398_P001 | Maize | cytosol | 93.19 | 49.44 |
| Zm00001d007340_P001 | Maize | cytosol | 90.05 | 46.36 |
| Zm00001d051676_P007 | Maize | endoplasmic reticulum, golgi | 68.06 | 38.24 |
| VIT_10s0003g04900.t01 | Wine grape | cytosol | 61.26 | 35.45 |
| Bra029572.1-P | Field mustard | cytosol | 50.26 | 34.78 |
| Zm00001d015804_P005 | Maize | cytosol, mitochondrion | 58.12 | 34.47 |
| CDX82807 | Canola | cytosol | 56.54 | 34.18 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 59.69 | 33.73 |
| Solyc02g024020.2.1 | Tomato | cytosol, mitochondrion | 58.12 | 33.53 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 58.64 | 33.14 |
| Bra038783.1-P | Field mustard | cytosol | 58.64 | 33.14 |
| CDX76421 | Canola | cytosol | 57.07 | 33.13 |
| AT4G05330.1 | Thale cress | cytosol, mitochondrion, nucleus | 58.12 | 33.04 |
| AT4G21160.4 | Thale cress | cytosol, mitochondrion, nucleus | 57.59 | 32.64 |
| KRH11784 | Soybean | cytosol | 54.97 | 32.41 |
| KRH36796 | Soybean | cytosol | 54.45 | 32.1 |
| CDY62002 | Canola | mitochondrion | 56.54 | 32.05 |
| CDY21329 | Canola | mitochondrion | 56.54 | 32.05 |
| KRH59111 | Soybean | cytosol | 54.97 | 32.01 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 57.59 | 31.88 |
| KRH42994 | Soybean | cytosol | 54.45 | 31.71 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 56.02 | 31.47 |
| CDY65341 | Canola | plastid | 57.59 | 29.65 |
| Bra013508.1-P | Field mustard | cytosol | 50.26 | 24.43 |
| CDY60369 | Canola | cytosol | 21.99 | 22.58 |
| Zm00001d038063_P001 | Maize | nucleus | 41.88 | 20.78 |
| Bra024773.1-P | Field mustard | cytosol | 29.32 | 19.31 |
| Zm00001d036830_P005 | Maize | plastid | 56.02 | 18.17 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 55.5 | 15.04 |
| Zm00001d021529_P002 | Maize | cytosol, extracellular, mitochondrion | 7.85 | 9.87 |
| Zm00001d044179_P001 | Maize | cytosol | 9.95 | 9.45 |
| Zm00001d011396_P001 | Maize | cytosol | 8.38 | 9.09 |
| Zm00001d006447_P001 | Maize | mitochondrion | 6.81 | 7.83 |
| Zm00001d011855_P002 | Maize | cytosol | 42.93 | 7.8 |
| Zm00001d019836_P003 | Maize | cytosol | 6.81 | 6.91 |
| Zm00001d018668_P002 | Maize | cytosol, extracellular, plastid | 6.81 | 5.99 |
Protein Annotations
| Gene3D:3.30.40.160 | MapMan:35.1 | UniProt:A0A1D6LDD0 | ProteinID:AQK78030.1 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 |
| GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 |
| PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF291 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0008428319 |
| EnsemblPlantsGene:Zm00001d034981 | EnsemblPlants:Zm00001d034981_P001 | EnsemblPlants:Zm00001d034981_T001 | : | : | : |
Description
ADP-ribosylation factor GTPase-activating protein AGD12
Coordinates
chr6:-:726875..728620
Molecular Weight (calculated)
21300.7 Da
IEP (calculated)
8.200
GRAVY (calculated)
-0.285
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTANRYQHI KSTKPVVGKA RKLKDLMIKS DNRICADCGA PDPKWASANI GVFLCLKCGD VHKALGPDIS KVLSVTLDDW SDSDIDSMVE VGGNSHANSI
101: YEAFLPKDRP KPKPDSTMEY RTKFIRAKYE TQDFLKPMIL SICLTVTNLS QEDTREFVRE LNITLVKGTN LAVRDMLTSD PYVVLTLNSL S
101: YEAFLPKDRP KPKPDSTMEY RTKFIRAKYE TQDFLKPMIL SICLTVTNLS QEDTREFVRE LNITLVKGTN LAVRDMLTSD PYVVLTLNSL S
001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ
Arabidopsis Description
AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.