Factsheet for Zm00001d036830_P005

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88634	Sorghum	cytosol	51.95	92.45
Os06t0609450-01	Rice	cytosol	19.35	82.61
GSMUA_Achr9P22350_001	Banana	cytosol	42.27	74.77
Zm00001d015804_P005	Maize	cytosol, mitochondrion	40.41	73.91
GSMUA_Achr4P03900_001	Banana	cytosol	41.43	73.72
Zm00001d017881_P001	Maize	cytosol	34.47	61.14
Zm00001d034981_P001	Maize	cytosol	18.17	56.02
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	31.58	54.71
Zm00001d038063_P001	Maize	nucleus	27.84	42.6
Zm00001d011396_P001	Maize	cytosol	12.39	41.48
Zm00001d006447_P001	Maize	mitochondrion	11.21	39.76
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	10.19	39.47
Zm00001d005398_P001	Maize	cytosol	23.09	37.78
Zm00001d044179_P001	Maize	cytosol	12.56	36.82
Zm00001d007340_P001	Maize	cytosol	22.24	35.31
Zm00001d019836_P003	Maize	cytosol	10.87	34.04
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	11.38	30.88
Zm00001d011855_P002	Maize	cytosol	28.01	15.7

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	UniProt:A0A1D6LS08	ProteinID:AQK82235.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008
InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	InterPro:NAM-associated_C	PFAM:PF00168	PFAM:PF01412
PFAM:PF14303	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245
SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI0008430C8F	EnsemblPlantsGene:Zm00001d036830
EnsemblPlants:Zm00001d036830_P005	EnsemblPlants:Zm00001d036830_T005	SEG:seg	:	:	:

Description

Putative calcium-dependent lipid-binding (CaLB domain) family protein

Coordinates

chr6:-:103104796..103110112

Molecular Weight (calculated)

65383.1 Da

IEP (calculated)

9.939

GRAVY (calculated)

-0.519

Length

589 amino acids

Sequence
(BLAST)

001: MVMDAAMARF EGKMGHPFKR HHWWQVVRHE PKWSAKHGLG SGSDSTANKR TRLGVSGEYS SGGTEDTEEE VPRPVGRDRA KAAARKTKTK GKGKEATSSE
101: STSEAFKMKN LWGGLVKAKL LKQWNILKGR STRDMDPAER PHSHSHRFRP GLRSVVLWLS SKVQRLVNPK GDQTDPPLLC SAHVREPPGK TQRRNSGDRN
201: PGTQLGELHA TAGRRLIHFL SLQLLVLVFF QLHPGYLLEG RASRAAKKKS SRETLLTLTE GDMARKLREL LQKSGNRVCA DCGAPDPKWA SANIGVFICL
301: KCSGVHRSLG THVSKVLSVT LDQWTDDEIN SMIEVGGNSY ANAIYEAFLP EGYQKPHPDS SQEERADFIR SKYELQEFLK PSLRLVSSNK GSLEATSSRK
401: HMDNSVSLSA SFSSEVTSFA SYIFQAGMVE FIGILKVKVI RGTKLAVRDL MSSDPYVVLT LGQQKAKTSV SKRNLNPVWN EELKLSVPQH YGPLKLQVFD
501: HDMLSKDDEM GDAEIDLQPM ISAATAFGDP DLLADMQIGK WLRSPDNALA RDSAVNVVGG KVKQEVSLRL QNVESGEVEL ELEWIPLNQ

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.