Factsheet for Zm00001d006447_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97258	Sorghum	mitochondrion	93.37	92.81
Os07t0501700-01	Rice	cytosol, mitochondrion	79.52	79.52
TraesCS2A01G229200.1	Wheat	endoplasmic reticulum, extracellular	74.7	74.7
HORVU6Hr1G091350.3	Barley	cytosol, endoplasmic reticulum	74.1	74.1
HORVU6Hr1G091440.1	Barley	cytosol, endoplasmic reticulum	74.1	74.1
TraesCS6B01G434600.1	Wheat	extracellular	71.08	70.66
TraesCS6D01G380000.1	Wheat	cytosol, extracellular	71.08	70.66
TraesCS6A01G394700.1	Wheat	cytosol, endoplasmic reticulum	70.48	70.06
TraesCS2B01G250600.1	Wheat	extracellular, vacuole	56.63	64.83
TraesCS2D01G233200.1	Wheat	endoplasmic reticulum, extracellular	74.7	62.94
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	48.19	52.63
Zm00001d011396_P001	Maize	cytosol	54.22	51.14
Zm00001d044179_P001	Maize	cytosol	51.81	42.79
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	48.8	37.33
Zm00001d019836_P003	Maize	cytosol	34.34	30.32
Zm00001d015804_P005	Maize	cytosol, mitochondrion	37.95	19.57
Zm00001d017881_P001	Maize	cytosol	36.14	18.07
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	36.75	17.94
Zm00001d038063_P001	Maize	nucleus	34.94	15.06
Zm00001d036830_P005	Maize	plastid	39.76	11.21
Zm00001d005398_P001	Maize	cytosol	21.69	10.0
Zm00001d034981_P001	Maize	cytosol	7.83	6.81
Zm00001d007340_P001	Maize	cytosol	15.06	6.74
Zm00001d011855_P002	Maize	cytosol	34.94	5.52

Protein Annotations

EMBL:EU958181	EnsemblPlants:Zm00001d006447_P001	EnsemblPlants:Zm00001d006447_T001	EnsemblPlantsGene:Zm00001d006447	EntrezGene:100281857	Gene3D:2.60.40.150
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF321
PFAM:PF00168	PFscan:PS50004	ProteinID:ONM23884.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI000182CB9D	UniProt:B6SZL6	MapMan:35.1	:	:	:

Description

GTPase activating protein

Coordinates

chr2:+:208477091..208479569

Molecular Weight (calculated)

18632.7 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.119

Length

166 amino acids

Sequence
(BLAST)

001: MECLLGLLKV RVVRGVHLAI CDPLTHSSDP YVVLRHGKQK VKSSIKYRTI NPEWNEELTL SITNMMNPVK IGLFDHDTFT KDDSMGNAEF CILNFVEIAK
101: QDLSDVPDGT VIKTIRPEKG SCLATESHIT WKDGKVSQDM VLKLRDTETG ELVLHLTWVN IPGVAM

Best Arabidopsis Sequence Match ( AT1G48590.2 )
(BLAST)

001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.