Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- mitochondrion 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G380000.1 | Wheat | cytosol, extracellular | 98.8 | 98.8 |
| TraesCS6A01G394700.1 | Wheat | cytosol, endoplasmic reticulum | 98.2 | 98.2 |
| HORVU6Hr1G091350.3 | Barley | cytosol, endoplasmic reticulum | 90.42 | 90.96 |
| HORVU6Hr1G091440.1 | Barley | cytosol, endoplasmic reticulum | 90.42 | 90.96 |
| Os07t0501700-01 | Rice | cytosol, mitochondrion | 76.65 | 77.11 |
| TraesCS2B01G250600.1 | Wheat | extracellular, vacuole | 63.47 | 73.1 |
| EER97258 | Sorghum | mitochondrion | 72.46 | 72.46 |
| Zm00001d006447_P001 | Maize | mitochondrion | 70.66 | 71.08 |
| TraesCS4B01G380100.1 | Wheat | cytosol | 50.3 | 50.0 |
| TraesCS2B01G250500.2 | Wheat | cytosol | 50.3 | 50.0 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 49.7 | 48.82 |
| TraesCS2B01G280800.1 | Wheat | cytosol | 44.91 | 44.12 |
| TraesCS5B01G166000.1 | Wheat | cytosol | 34.73 | 33.92 |
| TraesCS1B01G251400.1 | Wheat | cytosol | 41.92 | 28.34 |
| TraesCS6B01G190600.1 | Wheat | cytosol | 38.32 | 19.81 |
| TraesCS3B01G548000.1 | Wheat | cytosol | 38.32 | 13.45 |
| TraesCS6B01G314300.1 | Wheat | cytosol | 35.33 | 13.2 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G434600.1 | EnsemblPlantsGene:TraesCS6B01G434600 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF321 | PFAM:PF00168 | PFscan:PS50004 | PRINTS:PR00360 |
| SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | TIGR:cd04038 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6B:+:703146359..703147595
Molecular Weight (calculated)
19122.0 Da
IEP (calculated)
5.273
GRAVY (calculated)
-0.311
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLLGLLKV KVVRGLNLAI CDPLSHSSDP YVVIRLGQQK VKSSIKYKSI NPEWNEELTL SITNWTLPVK IEVFDHDTFT KDDTMGDAEF SILDFVEIAV
101: KDLSHVRDDT VMKTFQPNEE NCYSADSHIM WKDGKVTQNM ALKLRNTDTG ELIMHLEWVN LPPGMSR
101: KDLSHVRDDT VMKTFQPNEE NCYSADSHIM WKDGKVTQNM ALKLRNTDTG ELIMHLEWVN LPPGMSR
001: MENMLGLLRL HVIRGVNLAI RDSQSSDPYV IVRMGKQKLR TRVMKKNLNT EWNEDLTLSV TDPTLPVKIM VYDRDRFSRD DKMGDAIFHI DPFLEAIRIQ
101: NQLGGLPEGT VIMKIQASRQ NCLSEESKIV WHKGKIVQNM FLKLQNVERG EIELQLEWID VSGALTDDAE DVAF
101: NQLGGLPEGT VIMKIQASRQ NCLSEESKIV WHKGKIVQNM FLKLQNVERG EIELQLEWID VSGALTDDAE DVAF
Arabidopsis Description
CAR2Protein C2-DOMAIN ABA-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.