Subcellular Localization
min:
: max
Winner_takes_all: cytosol, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 3
- vacuole 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G091440.1 | Barley | cytosol, endoplasmic reticulum | 100.0 | 100.0 |
| TraesCS6B01G434600.1 | Wheat | extracellular | 90.96 | 90.42 |
| TraesCS6D01G380000.1 | Wheat | cytosol, extracellular | 90.96 | 90.42 |
| TraesCS6A01G394700.1 | Wheat | cytosol, endoplasmic reticulum | 90.36 | 89.82 |
| Os07t0501700-01 | Rice | cytosol, mitochondrion | 79.52 | 79.52 |
| EER97258 | Sorghum | mitochondrion | 77.11 | 76.65 |
| Zm00001d006447_P001 | Maize | mitochondrion | 74.1 | 74.1 |
| HORVU2Hr1G063790.1 | Barley | cytosol | 48.8 | 47.65 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 48.19 | 47.34 |
| HORVU5Hr1G052010.2 | Barley | cytosol | 36.14 | 26.55 |
| HORVU5Hr1G052030.1 | Barley | cytosol | 36.14 | 25.0 |
| HORVU2Hr1G048940.1 | Barley | cytosol, plastid | 18.07 | 21.9 |
| HORVU6Hr1G032940.1 | Barley | cytosol | 38.55 | 19.81 |
| HORVU1Hr1G057260.3 | Barley | cytosol | 42.17 | 17.11 |
| HORVU6Hr1G071850.3 | Barley | mitochondrion | 40.36 | 15.19 |
| HORVU3Hr1G108480.1 | Barley | cytosol | 37.95 | 13.12 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G091350.3 | EnsemblPlantsGene:HORVU6Hr1G091350 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF321 | PFAM:PF00168 | PFscan:PS50004 | PRINTS:PR00360 |
| SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0002952698 | UniProt:M0UKM3 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr6H:+:575531285..575532312
Molecular Weight (calculated)
19034.9 Da
IEP (calculated)
5.269
GRAVY (calculated)
-0.285
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLLGLLKV KVVRGLNLAI CDPLSHSSDP YVVIRLGQQK VKSSIKYKTI NPEWNEELTL SITNWTLPVK IEVFDHDTFT KDDTMGDAEF GILDFVEIAM
101: KDLSHVRDDT VMKTFHPEED NCFSADSHIT WKDGKVSQNI YLKLRNTDTG EIVMHLEWVN IPGMAR
101: KDLSHVRDDT VMKTFHPEED NCFSADSHIT WKDGKVSQNI YLKLRNTDTG EIVMHLEWVN IPGMAR
001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL
Arabidopsis Description
CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [cytosol,plasma membrane]
SUBAcon: [cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.