Factsheet for HORVU1Hr1G057260.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G251400.1	Wheat	cytosol	55.26	91.5
TraesCS1A01G239200.1	Wheat	cytosol	82.89	90.4
TraesCS1D01G239400.3	Wheat	cytosol	82.15	88.89
EES18146	Sorghum	cytosol	67.24	71.43
Zm00001d038063_P001	Maize	nucleus	66.01	70.13
Os05t0382000-01	Rice	cytosol	66.01	68.35
CDY69110	Canola	cytosol	13.45	58.51
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	49.14	57.93
GSMUA_Achr5P16180_001	Banana	cytosol	51.59	57.49
VIT_13s0019g00350.t01	Wine grape	cytosol	49.63	51.26
KRH13401	Soybean	cytosol	45.97	51.09
KRH20756	Soybean	cytosol	45.97	51.09
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	41.81	51.04
KRH30029	Soybean	cytosol	48.66	50.9
CDY22145	Canola	cytosol	47.43	50.65
AT3G07940.1	Thale cress	cytosol	46.94	49.87
Solyc08g043140.2.1	Tomato	cytosol	47.92	49.62
PGSC0003DMT400068533	Potato	cytosol	47.68	49.37
Bra001277.1-P	Field mustard	cytosol	45.48	48.44
CDX74022	Canola	cytosol	45.48	48.44
CDY28007	Canola	cytosol	46.94	47.29
CDY35974	Canola	cytosol	46.21	46.55
Bra029688.1-P	Field mustard	cytosol	46.21	46.55
KRH62915	Soybean	cytosol	39.36	45.87
HORVU3Hr1G108480.1	Barley	cytosol	52.81	45.0
HORVU6Hr1G032940.1	Barley	cytosol	34.72	43.96
HORVU6Hr1G091350.3	Barley	cytosol, endoplasmic reticulum	17.11	42.17
HORVU6Hr1G091440.1	Barley	cytosol, endoplasmic reticulum	17.11	42.17
HORVU0Hr1G039050.2	Barley	mitochondrion	16.63	40.24
HORVU2Hr1G063790.1	Barley	cytosol	14.91	35.88
HORVU6Hr1G071850.3	Barley	mitochondrion	32.03	29.71
HORVU5Hr1G052010.2	Barley	cytosol	14.43	26.11
HORVU5Hr1G052030.1	Barley	cytosol	14.67	25.0
HORVU2Hr1G048940.1	Barley	cytosol, plastid	6.85	20.44

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	UniProt:A0A287FRA3	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:HORVU1Hr1G057260	EnsemblPlants:HORVU1Hr1G057260.3
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF390	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI000B48051A	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:418909923..418913318

Molecular Weight (calculated)

46137.2 Da

IEP (calculated)

6.096

GRAVY (calculated)

-0.397

Length

409 amino acids

Sequence
(BLAST)

001: MIHPPRITGS EQRVSQSPAF LPSDLFPIRY LHIFQSCRVD SMRVCDLMLL FCLPRTCDEY SSQIDGDDHS DTSDADPSNA RDRLETLLNQ PANKFCADCG
101: TPDPKWAALP FGAFICIKCS GTHRSLGVHI SKVISVNLDE WTDEEVNCLA NSGGNATVNT KYEAFLPENY KKPRQDFSTE DRAVFIRKKY ELQQFMTNPQ
201: FACPLHKHGA EKRHNNQQHG GSKHGTFRNS WRKKDSENKG VKKMMDVGMI EFVGLIKVDI IRGTDLAVRD VMSSDPYVMI MLGHQSMKTK VIKNTLNPIW
301: NERLMLSIPD PVPPLKVQVF DKDTFTSDDR MGEAEVDIQP LISAAREYQN SMVTEPAICT FLASENSILV KDSVISIVDG KVEQEIALRL QNVEHGEIEI
401: KLECVPLSQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.