CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30029	Soybean	cytosol	78.92	70.84
KRH20756	Soybean	cytosol	67.52	64.4
KRH13401	Soybean	cytosol	66.67	63.59
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	56.7	59.4
TraesCS1B01G251400.1	Wheat	cytosol	37.89	53.85
VIT_13s0019g00350.t01	Wine grape	cytosol	60.4	53.54
Solyc08g043140.2.1	Tomato	cytosol	60.11	53.42
PGSC0003DMT400068533	Potato	cytosol	59.83	53.16
GSMUA_Achr5P16180_001	Banana	cytosol	55.56	53.13
CDY22145	Canola	cytosol	57.83	53.0
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	52.14	52.74
AT3G07940.1	Thale cress	cytosol	57.83	52.73
Bra001277.1-P	Field mustard	cytosol	54.7	50.0
CDX74022	Canola	cytosol	54.42	49.74
Bra029688.1-P	Field mustard	cytosol	56.7	49.01
CDY35974	Canola	cytosol	56.41	48.77
CDY28007	Canola	cytosol	56.41	48.77
KRH25661	Soybean	cytosol	8.83	46.97
Zm00001d038063_P001	Maize	nucleus	49.57	45.19
Os01t0951100-01	Rice	cytosol	49.0	45.14
EES18146	Sorghum	cytosol	49.29	44.94
KRG89347	Soybean	cytosol	8.26	43.28
TraesCS1D01G239400.3	Wheat	cytosol	46.15	42.86
TraesCS1A01G239200.1	Wheat	cytosol	45.58	42.67
Os05t0382000-01	Rice	cytosol	46.72	41.52
KRG97928	Soybean	cytosol	19.09	40.61
KRH59111	Soybean	cytosol	37.89	40.55
KRH30951	Soybean	cytosol	18.8	40.0
KRH42994	Soybean	cytosol	37.32	39.94
KRH11612	Soybean	cytosol	18.8	39.76
KRH36617	Soybean	cytosol	18.8	39.76
HORVU1Hr1G057260.3	Barley	cytosol	45.87	39.36
KRH48640	Soybean	cytosol	19.66	39.2
KRH36796	Soybean	cytosol	35.9	38.89
KRH11784	Soybean	cytosol	35.9	38.89
KRH41845	Soybean	cytosol	17.38	36.97
KRH51202	Soybean	cytosol	17.38	36.75
TraesCS3B01G548000.1	Wheat	cytosol	49.57	36.55
KRG94240	Soybean	cytosol	17.38	36.09
HORVU3Hr1G108480.1	Barley	cytosol	48.72	35.62
TraesCS3D01G494100.1	Wheat	cytosol	48.43	34.76
KRH38191	Soybean	cytosol	17.66	34.44
KRH60540	Soybean	cytosol	16.81	34.1
KRG94243	Soybean	cytosol, mitochondrion	16.52	33.33
KRH39078	Soybean	endoplasmic reticulum, extracellular	19.37	33.33
KRH39062	Soybean	cytosol	10.26	33.03
KRH50393	Soybean	cytosol	15.95	32.94
KRH71995	Soybean	cytosol	7.98	25.69
Zm00001d011855_P002	Maize	cytosol	48.43	16.18

Protein Annotations

Gene3D:2.60.40.150	Gene3D:3.30.40.160	MapMan:35.1	UniProt:A0A0R0KF93	EMBL:ACUP02002416	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_04G141600	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	EnsemblPlants:KRH62915	ProteinID:KRH62915
ProteinID:KRH62915.1	PFAM:PF00168	PFAM:PF01412	PFscan:PS50004	PANTHER:PTHR23180	PANTHER:PTHR23180:SF390
SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI0006EE0587	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:23909908..23914216

Molecular Weight (calculated)

39396.4 Da

IEP (calculated)

7.702

GRAVY (calculated)

-0.296

Length

351 amino acids

Sequence
(BLAST)

001: MIAMLTALCS ELPCGYKTKG CECWLRGQHH CMSNGAVVLV SNSKVHRTMN ICVLSLKLDE WTDEQVDALV KFGGNTVINM KYEACLPSNI KKPKPNSSIE
101: ERSDFIRRKY EFLQFLDIEE NLSCPFVPSH ARCSSYSERS SSSNNFPQDK KHYDKQETKS LIGSTFRNSW GRKDSEHKSS KKSNSLAGMI EFIGLIKVNV
201: VKGTNLVIRD VMTSDPYVII SLGHQSVKTR VIKSSLNPVW NESLMLSIPD NIPLLKVLVY DKDIFSTDDF MGKAEIDIQP LVSAAKAYEK SSINDSLQLG
301: KWVANGDNNT LVKDGTISLE DGKVKHDISV RLQHVERGVL EIELECVLLT Q

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.