CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00551
KRH40615

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01540.1	KRH00551	AT3G54220.1	19228333
AT2G01540.1	KRH40615	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38191	Soybean	cytosol	78.16	75.56
KRG94240	Soybean	cytosol	70.69	72.78
KRH50393	Soybean	cytosol	64.37	65.88
KRG89347	Soybean	cytosol	25.29	65.67
VIT_01s0011g05230.t01	Wine grape	cytosol	60.34	63.25
AT1G70810.1	Thale cress	cytosol	52.3	55.15
Bra024565.1-P	Field mustard	cytosol	48.85	53.12
AT1G70790.1	Thale cress	cytosol	56.32	52.97
Bra016185.1-P	Field mustard	cytosol	50.0	52.73
KRG97928	Soybean	cytosol	50.0	52.73
Bra016186.1-P	Field mustard	cytosol	55.17	51.89
KRH41845	Soybean	cytosol	48.85	51.52
KRH30951	Soybean	cytosol	48.85	51.52
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	49.43	51.5
GSMUA_Achr10P...	Banana	cytosol	47.13	50.62
EES01097	Sorghum	cytosol	47.7	50.0
PGSC0003DMT400042134	Potato	cytosol	38.51	49.63
AT1G70800.1	Thale cress	cytosol	49.43	49.43
KRH60540	Soybean	cytosol	48.85	49.13
Os02t0327000-01	Rice	cytosol	46.55	49.09
AT1G23140.1	Thale cress	cytosol, mitochondrion	46.55	49.09
Bra017445.1-P	Field mustard	cytosol	50.57	48.89
Bra024877.1-P	Field mustard	cytosol	50.57	48.89
Bra026650.1-P	Field mustard	cytosol	50.0	48.33
TraesCS2D01G501800.2	Wheat	mitochondrion	47.13	48.24
AT2G01540.1	Thale cress	cytosol	49.43	47.78
PGSC0003DMT400020051	Potato	cytosol	44.83	47.56
TraesCS2A01G501300.1	Wheat	mitochondrion	45.98	47.06
TraesCS2B01G529400.1	Wheat	mitochondrion	45.98	47.06
GSMUA_Achr2P15950_001	Banana	cytosol	46.55	46.82
Solyc04g007800.2.1	Tomato	cytosol	44.83	46.71
KRH48640	Soybean	cytosol	47.13	46.59
HORVU0Hr1G039050.2	Barley	mitochondrion	44.83	46.15
PGSC0003DMT400059720	Potato	cytosol	44.25	46.11
GSMUA_Achr6P07630_001	Banana	cytosol	43.68	45.78
Zm00001d011396_P001	Maize	cytosol	45.98	45.45
KRH39062	Soybean	cytosol	28.16	44.95
KRH39078	Soybean	endoplasmic reticulum, extracellular	49.43	42.16
Zm00001d044179_P001	Maize	cytosol	48.28	41.79
KRH25661	Soybean	cytosol	14.94	39.39
KRH36617	Soybean	cytosol	35.63	37.35
KRH11612	Soybean	cytosol	35.63	37.35
Bra003941.1-P	Field mustard	cytosol	51.72	35.57
KRH51202	Soybean	cytosol	33.91	35.54
Bra003940.1-P	Field mustard	cytosol	24.71	30.71
KRH36796	Soybean	cytosol	38.51	20.68
KRH42994	Soybean	cytosol	38.51	20.43
KRH59111	Soybean	cytosol	37.93	20.12
KRH11784	Soybean	cytosol	37.36	20.06
KRH13401	Soybean	cytosol	37.36	17.66
KRH20756	Soybean	cytosol	36.78	17.39
KRH62915	Soybean	cytosol	33.33	16.52
KRH30029	Soybean	cytosol	36.78	16.37
CDY23476	Canola	cytosol	1.72	2.54
KRH71995	Soybean	cytosol	0.57	0.92

Protein Annotations

EMBL:ACUP02011905	EnsemblPlants:KRG94243	EnsemblPlantsGene:GLYMA_19G070800	EntrezGene:100784381	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF296	PFAM:PF00168
PFscan:PS50004	ProteinID:KRG94242.1	ProteinID:KRG94243	ProteinID:KRG94243.1	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	UniParc:UPI000294A7AA	UniProt:K7MX28	MapMan:11.1.2.1.2	:	:

Description

hypothetical protein

Coordinates

chr19:-:23789510..23791764

Molecular Weight (calculated)

19589.5 Da

IEP (calculated)

4.446

GRAVY (calculated)

-0.349

Length

174 amino acids

Sequence
(BLAST)

001: MDNSILGLLK LRIKRGTNLA IRDAIKMHAS DPYVIINMGE QKLKTGVVKD NCNPEWNEEF TLSIKDVKTP IHLSVYDKDT LSGDDKMGEA DIDLKPYVQC
101: VQMGLNERPD DSSVKRIQPD DTNCLAEESN CIWQNGNIIQ EMILKLRNVE SGEVVVEIEW VDVIGCKGLS QVEL

Best Arabidopsis Sequence Match ( AT1G70790.1 )
(BLAST)

001: MEDKPLGILR VHVKRGINLA IRDATTSDPY VVITLANQKL KTRVINNNCN PVWNEQLTLS IKDVNDPIRL TVFDKDRFSG DDKMGDAEID FRPFLEAHQM
101: ELDFQKLPNG CAIKRIRPGR TNCLAEESSI TWSNGKIMQE MILRLKNVEC GEVELMLEWT DGPGCKGLGR EGSKKTPWMP TKRLD

Arabidopsis Description

CAR9Protein C2-DOMAIN ABA-RELATED 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.