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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plasma membrane
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G191300.1
TraesCS4B01G124000.1
TraesCS4D01G122000.1
TraesCS5A01G144000.1
TraesCS5B01G143100.1
TraesCS5D01G148000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G01540.1 TraesCS4A01G191300.1 AT3G54220.1 19228333
AT2G01540.1 TraesCS4B01G124000.1 AT3G54220.1 19228333
AT2G01540.1 TraesCS4D01G122000.1 AT3G54220.1 19228333
AT2G01540.1 TraesCS5A01G144000.1 AT3G54220.1 19228333
AT2G01540.1 TraesCS5B01G143100.1 AT3G54220.1 19228333
AT2G01540.1 TraesCS5D01G148000.1 AT3G54220.1 19228333
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G501300.1 Wheat mitochondrion 97.06 97.06
TraesCS2B01G529400.1 Wheat mitochondrion 97.06 97.06
HORVU0Hr1G039050.2 Barley mitochondrion 93.53 94.08
Os02t0327000-01 Rice cytosol 80.0 82.42
EES01097 Sorghum cytosol 78.24 80.12
Zm00001d011396_P001 Maize cytosol 74.71 72.16
GSMUA_Achr10P... Banana cytosol 63.53 66.67
Zm00001d044179_P001 Maize cytosol 76.47 64.68
KRG97928 Soybean cytosol 61.76 63.64
VIT_14s0006g01250.t01 Wine grape cytosol 61.18 63.03
GSMUA_Achr6P07630_001 Banana cytosol 61.18 62.65
KRH30951 Soybean cytosol 60.59 62.42
GSMUA_Achr2P15950_001 Banana cytosol 62.94 61.85
Solyc02g091520.2.1 Tomato cytosol, mitochondrion 58.82 60.61
PGSC0003DMT400078786 Potato cytosol 58.24 60.0
Solyc02g063360.2.1 Tomato cytosol 58.24 59.64
Solyc12g040800.1.1 Tomato cytosol 58.24 59.64
Solyc03g118720.2.1 Tomato cytosol, mitochondrion 57.06 58.79
Solyc02g063370.2.1 Tomato cytosol 57.06 58.43
Solyc03g118710.2.1 Tomato cytosol 56.47 58.18
CDY01709 Canola mitochondrion 57.06 57.74
Bra014145.1-P Field mustard mitochondrion 57.65 57.65
CDX77307 Canola mitochondrion 57.65 57.65
CDY16452 Canola mitochondrion 57.65 57.65
PGSC0003DMT400074100 Potato cytosol 55.88 57.58
Bra025441.1-P Field mustard cytosol 56.47 57.14
AT1G70810.1 Thale cress cytosol 55.29 56.97
KRH41845 Soybean cytosol 55.29 56.97
Bra028147.1-P Field mustard cytosol 55.88 56.55
CDX99693 Canola cytosol 55.88 56.55
Solyc06g068940.2.1 Tomato cytosol 54.71 56.36
VIT_17s0000g02290.t01 Wine grape cytosol, plastid 60.0 56.35
KRH48640 Soybean cytosol 58.24 56.25
Bra018410.1-P Field mustard mitochondrion 55.29 55.95
CDY27005 Canola cytosol 55.29 55.95
CDY38572 Canola mitochondrion 55.29 55.95
VIT_01s0011g05230.t01 Wine grape cytosol 54.12 55.42
PGSC0003DMT400037472 Potato cytosol 58.82 55.25
CDX74562 Canola cytosol 54.12 55.09
Bra028148.1-P Field mustard mitochondrion 54.12 54.76
CDX74561 Canola mitochondrion 54.12 54.76
AT5G37740.2 Thale cress cytosol 57.06 54.49
CDY71117 Canola cytosol 51.18 54.38
KRH60540 Soybean cytosol 55.29 54.34
CDY47746 Canola mitochondrion 53.53 54.17
Bra024565.1-P Field mustard cytosol 50.59 53.75
CDY04742 Canola cytosol 50.59 53.75
CDY71433 Canola cytosol 50.59 53.75
KRG89347 Soybean cytosol 21.18 53.73
AT3G17980.1 Thale cress cytosol 55.88 53.67
CDX75953 Canola cytosol 55.88 53.67
CDY51927 Canola cytosol 55.88 53.67
CDY27654 Canola cytosol 56.47 53.63
Bra008104.1-P Field mustard cytosol, mitochondrion 52.94 53.57
CDX82060 Canola mitochondrion 52.94 53.57
AT1G23140.1 Thale cress cytosol, mitochondrion 51.76 53.33
Bra016185.1-P Field mustard cytosol 50.59 52.12
CDX96279 Canola cytosol 50.59 52.12
CDY11543 Canola cytosol 50.59 52.12
Bra001693.1-P Field mustard cytosol 54.12 51.98
KRH39062 Soybean cytosol 32.94 51.38
Bra004161.1-P Field mustard cytosol 52.35 50.86
CDX96152 Canola cytosol 52.35 50.86
AT1G73580.1 Thale cress mitochondrion 50.0 50.6
AT1G66360.1 Thale cress cytosol 51.76 50.57
CDY07499 Canola cytosol 51.76 50.29
KRH50393 Soybean cytosol 48.82 48.82
TraesCS6D01G380000.1 Wheat cytosol, extracellular 47.65 48.5
CDY11544 Canola cytosol 52.35 48.11
KRH39078 Soybean endoplasmic reticulum, extracellular 57.65 48.04
AT1G48590.2 Thale cress cytosol, plasma membrane 56.47 48.0
AT1G70800.1 Thale cress cytosol 48.82 47.7
Bra016186.1-P Field mustard cytosol 51.76 47.57
CDX96278 Canola cytosol 51.76 47.57
KRG94240 Soybean cytosol 47.06 47.34
Solyc06g053390.2.1 Tomato cytosol, mitochondrion 46.47 47.31
KRH38191 Soybean cytosol 50.0 47.22
KRG94243 Soybean cytosol, mitochondrion 48.24 47.13
PGSC0003DMT400042134 Potato cytosol 37.06 46.67
AT1G70790.1 Thale cress cytosol 50.59 46.49
PGSC0003DMT400020051 Potato cytosol 44.71 46.34
PGSC0003DMT400059720 Potato cytosol 44.71 45.51
Bra024877.1-P Field mustard cytosol 47.65 45.0
CDY17665 Canola cytosol 47.65 45.0
CDY58016 Canola cytosol 47.65 45.0
Solyc04g007800.2.1 Tomato cytosol 44.12 44.91
AT2G01540.1 Thale cress cytosol 47.06 44.44
TraesCS2D01G262500.1 Wheat cytosol 44.12 44.12
Bra017445.1-P Field mustard cytosol 46.47 43.89
CDY04090 Canola cytosol 46.47 43.89
CDY70365 Canola cytosol 46.47 43.89
CDY23479 Canola cytosol 47.65 43.78
TraesCS2D01G233300.1 Wheat cytosol 42.94 43.45
Bra026650.1-P Field mustard cytosol 45.88 43.33
CDY09436 Canola cytosol 45.88 43.33
CDY48816 Canola cytosol 45.88 43.33
TraesCS2D01G233200.1 Wheat endoplasmic reticulum, extracellular 48.24 41.62
TraesCS5D01G173700.1 Wheat cytosol 38.24 38.01
CDY23477 Canola cytosol 27.06 36.8
CDY49631 Canola extracellular 23.53 33.33
CDY01706 Canola golgi, mitochondrion, plasma membrane, plastid 45.29 32.63
Bra003941.1-P Field mustard cytosol 48.24 32.41
CDY70119 Canola cytosol 48.24 32.41
Bra003940.1-P Field mustard cytosol 24.12 29.29
CDX68329 Canola cytosol 23.53 28.99
TraesCS1D01G239400.3 Wheat cytosol 41.18 18.52
TraesCS6D01G152000.1 Wheat cytosol 36.47 18.18
TraesCS6D01G265900.2 Wheat cytosol 39.41 15.3
TraesCS3D01G494100.1 Wheat cytosol 42.35 14.72
CDY23476 Canola cytosol 0.59 0.85
Protein Annotations
MapMan:11.1.2.1.2InterPro:C2_domGO:GO:0003674GO:GO:0005096GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006950GO:GO:0008150GO:GO:0009605
GO:GO:0009607GO:GO:0009611GO:GO:0009628GO:GO:0009651GO:GO:0030234GO:GO:0043547
GO:GO:1901002GO:GO:1902479InterPro:IPR000008PFAM:PF00168PFscan:PS50004PANTHER:PTHR23180
PANTHER:PTHR23180:SF310SMART:SM00239SUPFAM:SSF49562EnsemblPlantsGene:TraesCS2D01G501800EnsemblPlants:TraesCS2D01G501800.2TIGR:cd04038
Description
No Description!
Coordinates
chr2D:+:596029536..596030505
Molecular Weight (calculated)
18900.0 Da
IEP (calculated)
5.342
GRAVY (calculated)
-0.135
Length
170 amino acids
Sequence
(BLAST)
001: MLGHLVGLVK VRVTRGVNLA IRDLRSSDPY VVVRMGKQKL KTRVVRKSIN PEWNDELTLS IEDPTIPVKL DVFDKDTFFD DPMGNAELDI GPLVEAATMR
101: IQLQGVADNS VVKKLVPNRQ NCLAEESAIY LSEGTVKQDV VLRLRNVECG EVELQLQWID IPGSKGASGF
Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)
001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.