Factsheet for TraesCS6D01G265900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G285400.2	Wheat	golgi	75.57	99.7
HORVU6Hr1G071850.3	Barley	mitochondrion	88.36	87.76
TraesCS6B01G314300.1	Wheat	cytosol	87.67	85.91
EES05611	Sorghum	cytosol	62.79	82.83
Zm00001d017881_P001	Maize	cytosol	62.56	82.53
Os02t0722500-01	Rice	cytosol	61.64	81.33
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	55.71	71.76
GSMUA_Achr9P12760_001	Banana	cytosol	50.46	67.17
Bra029572.1-P	Field mustard	cytosol	41.55	65.94
GSMUA_Achr9P27900_001	Banana	cytosol	51.6	65.13
VIT_10s0003g04900.t01	Wine grape	cytosol	48.17	63.94
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	47.03	62.24
CDX82807	Canola	cytosol	44.75	62.03
CDX76421	Canola	cytosol	46.35	61.7
KRH11784	Soybean	cytosol	45.43	61.42
KRH36796	Soybean	cytosol	45.43	61.42
CDY62002	Canola	mitochondrion	46.8	60.83
CDY21329	Canola	mitochondrion	46.8	60.83
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	46.58	60.71
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	46.58	60.53
KRH59111	Soybean	cytosol	44.75	59.76
CDY46364	Canola	cytosol, mitochondrion, nucleus	46.8	59.42
CDX94026	Canola	cytosol, mitochondrion, nucleus	45.66	59.17
KRH42994	Soybean	cytosol	44.29	59.15
CDY39164	Canola	cytosol, mitochondrion, nucleus	45.89	59.12
CDY58481	Canola	cytosol, mitochondrion, nucleus	44.98	58.28
Bra038783.1-P	Field mustard	cytosol	44.98	58.28
KRH71995	Soybean	cytosol	14.16	56.88
CDY65341	Canola	plastid	47.03	55.53
TraesCS6D01G152000.1	Wheat	cytosol	43.15	55.43
Bra013508.1-P	Field mustard	cytosol	42.24	47.07
Bra024773.1-P	Field mustard	cytosol	28.08	42.41
TraesCS2D01G501800.2	Wheat	mitochondrion	15.3	39.41
TraesCS2D01G233300.1	Wheat	cytosol	15.07	39.29
TraesCS5D01G173700.1	Wheat	cytosol	15.07	38.6
TraesCS6D01G380000.1	Wheat	cytosol, extracellular	14.38	37.72
TraesCS2D01G262500.1	Wheat	cytosol	13.93	35.88
TraesCS1D01G239400.3	Wheat	cytosol	30.14	34.92
CDY60369	Canola	cytosol	14.16	33.33
TraesCS2D01G233200.1	Wheat	endoplasmic reticulum, extracellular	14.38	31.98
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	44.06	27.38
TraesCS3D01G494100.1	Wheat	cytosol	29.45	26.38

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0008150	GO:GO:0030234
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF291	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	EnsemblPlantsGene:TraesCS6D01G265900	EnsemblPlants:TraesCS6D01G265900.2	SEG:seg

Description

No Description!

Coordinates

chr6D:-:375293319..375298543

Molecular Weight (calculated)

48974.3 Da

IEP (calculated)

8.872

GRAVY (calculated)

-0.523

Length

438 amino acids

Sequence
(BLAST)

001: MANGRLDRPL IHRETKLQKY TTGRIIITRD PHITQPTWFP SRRRASFARP QPASQRDEAG GRSLHRRRRP HPPKPPAVPA HAALRDPPPG TEIFFVVVSY
101: PKFASNMSAA NRSQPIKLNR PVVGKARKLK DLMLKSDNRV CADCSAPDPK WASSNIGVFL CLKCGDVHRA LGQDISNVLS LTLDDWSDSD IDSMIEVGGN
201: SYANSIYEAF LPKDHPKPKP DSPMEYRTKF IRAKYETQDF LKPSLRISSK AGLESTNSLN SVDNSFSSTS RKHAPEDTRE FVGQLNITVV KGSGLAVRDM
301: LTSDPYVVLS LGEQKAQTTV KASDLNPVWN EVLNLSVPRN YGPLKLEVYD HDTFSADDIM GEAEIDLKPM ITAAMAFGDP SRHADMQIGR WFMTRDNCLL
401: SDSIVNISSG KVKQEVYLKL QNVESGEMEL ELEWARLD

Best Arabidopsis Sequence Match ( AT4G05330.3 )
(BLAST)

001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.