Factsheet for TraesCS6B01G314300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G285400.2	Wheat	golgi	71.14	95.78
TraesCS6D01G265900.2	Wheat	cytosol	85.91	87.67
HORVU6Hr1G071850.3	Barley	mitochondrion	79.64	80.73
Zm00001d017881_P001	Maize	cytosol	59.28	79.82
EES05611	Sorghum	cytosol	59.28	79.82
Os02t0722500-01	Rice	cytosol	58.17	78.31
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	52.57	69.12
GSMUA_Achr9P12760_001	Banana	cytosol	46.98	63.83
GSMUA_Achr9P27900_001	Banana	cytosol	49.22	63.4
Bra029572.1-P	Field mustard	cytosol	38.93	63.04
VIT_10s0003g04900.t01	Wine grape	cytosol	45.64	61.82
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	44.3	59.82
CDX76421	Canola	cytosol	43.62	59.27
KRH11784	Soybean	cytosol	42.95	59.26
KRH36796	Soybean	cytosol	42.95	59.26
CDX82807	Canola	cytosol	41.83	59.18
CDY62002	Canola	mitochondrion	44.3	58.75
CDY21329	Canola	mitochondrion	44.3	58.75
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	44.07	58.46
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	43.85	58.33
KRH59111	Soybean	cytosol	42.06	57.32
CDY46364	Canola	cytosol, mitochondrion, nucleus	44.07	57.1
CDX94026	Canola	cytosol, mitochondrion, nucleus	43.18	57.1
CDY39164	Canola	cytosol, mitochondrion, nucleus	43.4	57.06
TraesCS6B01G190600.1	Wheat	cytosol	41.16	56.97
KRH71995	Soybean	cytosol	13.87	56.88
KRH42994	Soybean	cytosol	41.61	56.71
CDY58481	Canola	cytosol, mitochondrion, nucleus	42.51	56.21
Bra038783.1-P	Field mustard	cytosol	42.51	56.21
CDY65341	Canola	plastid	44.07	53.1
Bra013508.1-P	Field mustard	cytosol	39.37	44.78
Bra024773.1-P	Field mustard	cytosol	27.74	42.76
TraesCS4B01G380100.1	Wheat	cytosol	14.32	38.1
TraesCS2B01G529400.1	Wheat	mitochondrion	14.09	37.06
TraesCS2B01G250500.2	Wheat	cytosol	13.87	36.9
TraesCS2B01G250600.1	Wheat	extracellular, vacuole	11.86	36.55
TraesCS5B01G166000.1	Wheat	cytosol	13.65	35.67
TraesCS1B01G251400.1	Wheat	cytosol	19.69	35.63
TraesCS6B01G434600.1	Wheat	extracellular	13.2	35.33
TraesCS2B01G280800.1	Wheat	cytosol	13.42	35.29
CDY60369	Canola	cytosol	14.09	33.87
TraesCS3B01G548000.1	Wheat	cytosol	28.19	26.47
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	41.16	26.1

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0008150	GO:GO:0030234
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF291	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	EnsemblPlantsGene:TraesCS6B01G314300	EnsemblPlants:TraesCS6B01G314300.1	SEG:seg

Description

No Description!

Coordinates

chr6B:-:561835717..561841643

Molecular Weight (calculated)

49701.1 Da

IEP (calculated)

9.966

GRAVY (calculated)

-0.569

Length

447 amino acids

Sequence
(BLAST)

001: MANGRLDRPL IHRETKLQKY TTGRIIITRD PHITQPHVAV LRLRDHSPRA SATKPGGDPS TAAGDPIPRS RRRYRPTPPS ATPPPGTEIF FVVVSYPKFA
101: SNMSAANRSQ PIKLNRPVVG KARKLKDLML KSDNRVCADC SAPDPKWASS NIGVFLCLKC GDVHRALGQD ISNVLSLTLD DWSDSDIDSM IEVGGNSYAN
201: SIYEAFLPKD HPKPKPDSPM EYRTKFIRAK YETQDFLKPS LRISSKAGLE STNSLNSVDN SFSSTSRKHA PEDTREFVGQ LNVTVVKGSG LAVRDMLTSD
301: PYVVLSLGEQ KAQTTVKASD LNPVWNEVLN LSVPRNYGPL KLEVYDHDTF SADDIMGEAE IDLKPMITAA MAFGDPSRHA DMQIGRWFMT RDNCLLSDSI
401: VNISSGKVKQ EVYLKLQNVE SASFSRGRTP PWQSQPRRSR RRPGSRH

Best Arabidopsis Sequence Match ( AT4G05330.3 )
(BLAST)

001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.