Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX76421 | Canola | cytosol | 87.6 | 98.78 |
AT4G21160.4 | Thale cress | cytosol, mitochondrion, nucleus | 81.13 | 89.32 |
CDX82807 | Canola | cytosol | 76.01 | 89.24 |
CDY58481 | Canola | cytosol, mitochondrion, nucleus | 79.78 | 87.57 |
CDX94026 | Canola | cytosol, mitochondrion, nucleus | 79.25 | 86.98 |
CDY46364 | Canola | cytosol, mitochondrion, nucleus | 76.55 | 82.32 |
CDY62002 | Canola | mitochondrion | 74.66 | 82.2 |
CDY21329 | Canola | mitochondrion | 74.39 | 81.9 |
CDY39164 | Canola | cytosol, mitochondrion, nucleus | 74.66 | 81.47 |
Solyc02g024020.2.1 | Tomato | cytosol, mitochondrion | 66.31 | 74.32 |
VIT_10s0003g04900.t01 | Wine grape | cytosol | 66.04 | 74.24 |
Os06t0609450-01 | Rice | cytosol | 24.8 | 66.67 |
KRH71995 | Soybean | cytosol | 18.87 | 64.22 |
EER88634 | Sorghum | cytosol | 56.06 | 62.84 |
Os02t0198300-02 | Rice | plasma membrane | 54.18 | 62.81 |
KXG29722 | Sorghum | cytosol | 52.56 | 62.3 |
TraesCS6A01G285400.2 | Wheat | golgi | 55.26 | 61.75 |
EES05611 | Sorghum | cytosol | 55.26 | 61.75 |
HORVU6Hr1G032940.1 | Barley | cytosol | 53.64 | 61.61 |
TraesCS6A01G160700.1 | Wheat | cytosol | 53.37 | 61.3 |
TraesCS6B01G190600.1 | Wheat | cytosol | 53.37 | 61.3 |
Os02t0722500-01 | Rice | cytosol | 53.37 | 59.64 |
TraesCS6D01G152000.1 | Wheat | cytosol | 53.64 | 58.36 |
Zm00001d034981_P001 | Maize | cytosol | 29.65 | 57.59 |
GSMUA_Achr7P20210_001 | Banana | cytosol | 33.42 | 55.11 |
CDY69110 | Canola | cytosol | 13.48 | 53.19 |
TraesCS6D01G265900.2 | Wheat | cytosol | 55.53 | 47.03 |
HORVU6Hr1G071850.3 | Barley | mitochondrion | 55.26 | 46.49 |
CDY60369 | Canola | cytosol | 23.18 | 46.24 |
TraesCS6B01G314300.1 | Wheat | cytosol | 53.1 | 44.07 |
CDY22145 | Canola | cytosol | 45.28 | 43.86 |
CDY01709 | Canola | mitochondrion | 19.41 | 42.86 |
CDX74561 | Canola | mitochondrion | 19.14 | 42.26 |
CDX74562 | Canola | cytosol | 18.87 | 41.92 |
CDX82060 | Canola | mitochondrion | 18.87 | 41.67 |
CDY47746 | Canola | mitochondrion | 18.87 | 41.67 |
CDX74022 | Canola | cytosol | 42.59 | 41.15 |
CDY71117 | Canola | cytosol | 17.52 | 40.62 |
CDY38572 | Canola | mitochondrion | 18.33 | 40.48 |
CDY27005 | Canola | cytosol | 18.33 | 40.48 |
CDX99693 | Canola | cytosol | 18.33 | 40.48 |
CDY35974 | Canola | cytosol | 44.2 | 40.39 |
CDY28007 | Canola | cytosol | 43.94 | 40.15 |
CDY04742 | Canola | cytosol | 17.25 | 40.0 |
CDY71433 | Canola | cytosol | 17.25 | 40.0 |
CDX96279 | Canola | cytosol | 17.79 | 40.0 |
CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 76.01 | 40.0 |
CDX77307 | Canola | mitochondrion | 18.33 | 40.0 |
CDY11543 | Canola | cytosol | 17.79 | 40.0 |
CDY27654 | Canola | cytosol | 19.14 | 39.66 |
Zm00001d005398_P001 | Maize | cytosol | 38.27 | 39.44 |
CDY16452 | Canola | mitochondrion | 18.06 | 39.41 |
CDY11544 | Canola | cytosol | 19.41 | 38.92 |
CDY07499 | Canola | cytosol | 18.33 | 38.86 |
CDX96152 | Canola | cytosol | 18.33 | 38.86 |
CDY51927 | Canola | cytosol | 18.33 | 38.42 |
CDX96278 | Canola | cytosol | 19.14 | 38.38 |
CDX75953 | Canola | cytosol | 18.06 | 37.85 |
CDY70365 | Canola | cytosol | 18.33 | 37.78 |
CDY04090 | Canola | cytosol | 18.33 | 37.78 |
CDY58016 | Canola | cytosol | 18.33 | 37.78 |
CDY17665 | Canola | cytosol | 18.06 | 37.22 |
CDY09436 | Canola | cytosol | 17.79 | 36.67 |
CDY48816 | Canola | cytosol | 17.79 | 36.67 |
CDY23479 | Canola | cytosol | 17.79 | 35.68 |
Zm00001d007340_P001 | Maize | cytosol | 35.58 | 35.58 |
CDY40545 | Canola | endoplasmic reticulum, extracellular | 18.87 | 35.35 |
CDY49631 | Canola | extracellular | 9.7 | 30.0 |
CDY70119 | Canola | cytosol | 19.95 | 29.25 |
CDY23477 | Canola | cytosol | 8.63 | 25.6 |
CDY01706 | Canola | golgi, mitochondrion, plasma membrane, plastid | 15.09 | 23.73 |
CDX68329 | Canola | cytosol | 6.74 | 18.12 |
CDY23476 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
Gene3D:2.60.40.150 | MapMan:22.3.4.3 | Gene3D:3.30.40.160 | GO:A0A078JHZ6 | UniProt:A0A078JHZ6 | InterPro:ARFGAP/RecO |
InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf | InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDY65341 | ProteinID:CDY65341 |
ProteinID:CDY65341.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 |
GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00045648001 | InterPro:IPR000008 | InterPro:IPR001164 | InterPro:IPR035892 |
InterPro:IPR038508 | PFAM:PF00168 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50004 | PFscan:PS50115 |
PANTHER:PTHR23180 | PANTHER:PTHR23180:SF245 | SMART:SM00105 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF57863 |
UniParc:UPI0004EE4E6D | SEG:seg | : | : | : | : |
Description
BnaC03g64360DBnaC03g64360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHZ6]
Coordinates
chrLK034746:+:13166..15815
Molecular Weight (calculated)
40931.8 Da
IEP (calculated)
4.910
GRAVY (calculated)
-0.215
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLQLNPTL HLCKNIISLP LSLSLSLTLF DGCYLSRRAM SHSAASSGKR RIRDLLTQSD NRVCADCGAP DPKWASANIG VFICLKCCGV HRSLGTHVSK
101: VLSVTLDEWS DEEVDSMIEI GGNASANSIY EAFIPDGSSK PGPDASHDHR MRFIRSKYEF QEFLKPSLRI TSGKTSSTKS SSYRSSSLSS NIIDSFRTTS
201: SSQKPQLEGM VEFIGLLKVT LKKGTNLAIR DMMTSDPYVV LTLGQQTAQS TVMKSNLNPV WNEELMLSVP HDYGSVKLQV FDYDTFSADD IMGEAEIDIQ
301: PLITSAMAFG DPEMFGDMQI GKWLKSNDNA LIEDSIINIA DGKVKQEVQI KLQNVESGEL ELELEWLPLD Q
101: VLSVTLDEWS DEEVDSMIEI GGNASANSIY EAFIPDGSSK PGPDASHDHR MRFIRSKYEF QEFLKPSLRI TSGKTSSTKS SSYRSSSLSS NIIDSFRTTS
201: SSQKPQLEGM VEFIGLLKVT LKKGTNLAIR DMMTSDPYVV LTLGQQTAQS TVMKSNLNPV WNEELMLSVP HDYGSVKLQV FDYDTFSADD IMGEAEIDIQ
301: PLITSAMAFG DPEMFGDMQI GKWLKSNDNA LIEDSIINIA DGKVKQEVQI KLQNVESGEL ELELEWLPLD Q
001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ
Arabidopsis Description
AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.