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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76421 Canola cytosol 87.6 98.78
AT4G21160.4 Thale cress cytosol, mitochondrion, nucleus 81.13 89.32
CDX82807 Canola cytosol 76.01 89.24
CDY58481 Canola cytosol, mitochondrion, nucleus 79.78 87.57
CDX94026 Canola cytosol, mitochondrion, nucleus 79.25 86.98
CDY46364 Canola cytosol, mitochondrion, nucleus 76.55 82.32
CDY62002 Canola mitochondrion 74.66 82.2
CDY21329 Canola mitochondrion 74.39 81.9
CDY39164 Canola cytosol, mitochondrion, nucleus 74.66 81.47
Solyc02g024020.2.1 Tomato cytosol, mitochondrion 66.31 74.32
VIT_10s0003g04900.t01 Wine grape cytosol 66.04 74.24
Os06t0609450-01 Rice cytosol 24.8 66.67
KRH71995 Soybean cytosol 18.87 64.22
EER88634 Sorghum cytosol 56.06 62.84
Os02t0198300-02 Rice plasma membrane 54.18 62.81
KXG29722 Sorghum cytosol 52.56 62.3
TraesCS6A01G285400.2 Wheat golgi 55.26 61.75
EES05611 Sorghum cytosol 55.26 61.75
HORVU6Hr1G032940.1 Barley cytosol 53.64 61.61
TraesCS6A01G160700.1 Wheat cytosol 53.37 61.3
TraesCS6B01G190600.1 Wheat cytosol 53.37 61.3
Os02t0722500-01 Rice cytosol 53.37 59.64
TraesCS6D01G152000.1 Wheat cytosol 53.64 58.36
Zm00001d034981_P001 Maize cytosol 29.65 57.59
GSMUA_Achr7P20210_001 Banana cytosol 33.42 55.11
CDY69110 Canola cytosol 13.48 53.19
TraesCS6D01G265900.2 Wheat cytosol 55.53 47.03
HORVU6Hr1G071850.3 Barley mitochondrion 55.26 46.49
CDY60369 Canola cytosol 23.18 46.24
TraesCS6B01G314300.1 Wheat cytosol 53.1 44.07
CDY22145 Canola cytosol 45.28 43.86
CDY01709 Canola mitochondrion 19.41 42.86
CDX74561 Canola mitochondrion 19.14 42.26
CDX74562 Canola cytosol 18.87 41.92
CDX82060 Canola mitochondrion 18.87 41.67
CDY47746 Canola mitochondrion 18.87 41.67
CDX74022 Canola cytosol 42.59 41.15
CDY71117 Canola cytosol 17.52 40.62
CDY38572 Canola mitochondrion 18.33 40.48
CDY27005 Canola cytosol 18.33 40.48
CDX99693 Canola cytosol 18.33 40.48
CDY35974 Canola cytosol 44.2 40.39
CDY28007 Canola cytosol 43.94 40.15
CDY04742 Canola cytosol 17.25 40.0
CDY71433 Canola cytosol 17.25 40.0
CDX96279 Canola cytosol 17.79 40.0
CDX79040 Canola cytosol, mitochondrion, nucleus, plastid 76.01 40.0
CDX77307 Canola mitochondrion 18.33 40.0
CDY11543 Canola cytosol 17.79 40.0
CDY27654 Canola cytosol 19.14 39.66
Zm00001d005398_P001 Maize cytosol 38.27 39.44
CDY16452 Canola mitochondrion 18.06 39.41
CDY11544 Canola cytosol 19.41 38.92
CDY07499 Canola cytosol 18.33 38.86
CDX96152 Canola cytosol 18.33 38.86
CDY51927 Canola cytosol 18.33 38.42
CDX96278 Canola cytosol 19.14 38.38
CDX75953 Canola cytosol 18.06 37.85
CDY70365 Canola cytosol 18.33 37.78
CDY04090 Canola cytosol 18.33 37.78
CDY58016 Canola cytosol 18.33 37.78
CDY17665 Canola cytosol 18.06 37.22
CDY09436 Canola cytosol 17.79 36.67
CDY48816 Canola cytosol 17.79 36.67
CDY23479 Canola cytosol 17.79 35.68
Zm00001d007340_P001 Maize cytosol 35.58 35.58
CDY40545 Canola endoplasmic reticulum, extracellular 18.87 35.35
CDY49631 Canola extracellular 9.7 30.0
CDY70119 Canola cytosol 19.95 29.25
CDY23477 Canola cytosol 8.63 25.6
CDY01706 Canola golgi, mitochondrion, plasma membrane, plastid 15.09 23.73
CDX68329 Canola cytosol 6.74 18.12
CDY23476 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:2.60.40.150MapMan:22.3.4.3Gene3D:3.30.40.160GO:A0A078JHZ6UniProt:A0A078JHZ6InterPro:ARFGAP/RecO
InterPro:ArfGAP_domInterPro:ArfGAP_dom_sfInterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDY65341ProteinID:CDY65341
ProteinID:CDY65341.1GO:GO:0003674GO:GO:0005096GO:GO:0005488GO:GO:0008150GO:GO:0030234
GO:GO:0043547GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00045648001InterPro:IPR000008InterPro:IPR001164InterPro:IPR035892
InterPro:IPR038508PFAM:PF00168PFAM:PF01412PRINTS:PR00405PFscan:PS50004PFscan:PS50115
PANTHER:PTHR23180PANTHER:PTHR23180:SF245SMART:SM00105SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF57863
UniParc:UPI0004EE4E6DSEG:seg::::
Description
BnaC03g64360DBnaC03g64360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHZ6]
Coordinates
chrLK034746:+:13166..15815
Molecular Weight (calculated)
40931.8 Da
IEP (calculated)
4.910
GRAVY (calculated)
-0.215
Length
371 amino acids
Sequence
(BLAST)
001: MAPLQLNPTL HLCKNIISLP LSLSLSLTLF DGCYLSRRAM SHSAASSGKR RIRDLLTQSD NRVCADCGAP DPKWASANIG VFICLKCCGV HRSLGTHVSK
101: VLSVTLDEWS DEEVDSMIEI GGNASANSIY EAFIPDGSSK PGPDASHDHR MRFIRSKYEF QEFLKPSLRI TSGKTSSTKS SSYRSSSLSS NIIDSFRTTS
201: SSQKPQLEGM VEFIGLLKVT LKKGTNLAIR DMMTSDPYVV LTLGQQTAQS TVMKSNLNPV WNEELMLSVP HDYGSVKLQV FDYDTFSADD IMGEAEIDIQ
301: PLITSAMAFG DPEMFGDMQI GKWLKSNDNA LIEDSIINIA DGKVKQEVQI KLQNVESGEL ELELEWLPLD Q
Best Arabidopsis Sequence Match ( AT4G05330.3 )
(BLAST)
001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ
Arabidopsis Description
AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.