CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014145.1-P	Field mustard	mitochondrion	100.0	100.0
CDX77307	Canola	mitochondrion	97.65	97.65
CDY51927	Canola	cytosol	82.35	79.1
CDX75953	Canola	cytosol	81.18	77.97
KRH41845	Soybean	cytosol	72.94	75.15
AT1G48590.2	Thale cress	cytosol, plasma membrane	87.06	74.0
KRH60540	Soybean	cytosol	75.29	73.99
Solyc03g118710.2.1	Tomato	cytosol	70.59	72.73
Solyc12g040800.1.1	Tomato	cytosol	70.59	72.29
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	69.41	71.52
PGSC0003DMT400074100	Potato	cytosol	68.24	70.3
KRH48640	Soybean	cytosol	71.18	68.75
Solyc06g068940.2.1	Tomato	cytosol	65.88	67.88
PGSC0003DMT400037472	Potato	cytosol	71.76	67.4
CDY38572	Canola	mitochondrion	65.29	66.07
CDY27005	Canola	cytosol	64.71	65.48
CDX82060	Canola	mitochondrion	64.71	65.48
GSMUA_Achr10P...	Banana	cytosol	62.35	65.43
CDX99693	Canola	cytosol	64.12	64.88
CDY47746	Canola	mitochondrion	64.12	64.88
CDY01709	Canola	mitochondrion	63.53	64.29
KRH39062	Soybean	cytosol	40.59	63.3
GSMUA_Achr6P07630_001	Banana	cytosol	61.18	62.65
CDX74562	Canola	cytosol	61.18	62.28
CDX74561	Canola	mitochondrion	60.59	61.31
GSMUA_Achr2P15950_001	Banana	cytosol	61.76	60.69
CDY71117	Canola	cytosol	57.06	60.62
KRH39078	Soybean	endoplasmic reticulum, extracellular	72.35	60.29
CDY27654	Canola	cytosol	62.94	59.78
Os02t0327000-01	Rice	cytosol	57.65	59.39
EES01097	Sorghum	cytosol	57.65	59.04
TraesCS2A01G501300.1	Wheat	mitochondrion	58.82	58.82
CDY71433	Canola	cytosol	55.29	58.75
CDY04742	Canola	cytosol	55.29	58.75
CDY11543	Canola	cytosol	56.47	58.18
CDX96279	Canola	cytosol	56.47	58.18
TraesCS2D01G501800.2	Wheat	mitochondrion	57.65	57.65
TraesCS2B01G529400.1	Wheat	mitochondrion	57.65	57.65
HORVU0Hr1G039050.2	Barley	mitochondrion	57.06	57.4
CDX96152	Canola	cytosol	55.88	54.29
CDY07499	Canola	cytosol	55.29	53.71
Zm00001d011396_P001	Maize	cytosol	54.71	52.84
CDY11544	Canola	cytosol	56.47	51.89
CDX96278	Canola	cytosol	55.88	51.35
Zm00001d044179_P001	Maize	cytosol	58.24	49.25
CDY04090	Canola	cytosol	51.76	48.89
CDY70365	Canola	cytosol	51.76	48.89
CDY58016	Canola	cytosol	51.18	48.33
CDY17665	Canola	cytosol	51.18	48.33
CDY09436	Canola	cytosol	50.59	47.78
CDY48816	Canola	cytosol	50.59	47.78
CDY23479	Canola	cytosol	51.18	47.03
CDY23477	Canola	cytosol	28.24	38.4
CDY69110	Canola	cytosol	21.18	38.3
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	50.0	36.02
CDY40545	Canola	endoplasmic reticulum, extracellular	41.18	35.35
CDY49631	Canola	extracellular	24.71	35.0
CDY70119	Canola	cytosol	51.18	34.39
CDX68329	Canola	cytosol	22.35	27.54
CDY21329	Canola	mitochondrion	41.76	21.07
CDY62002	Canola	mitochondrion	41.76	21.07
CDX82807	Canola	cytosol	38.82	20.89
CDY39164	Canola	cytosol, mitochondrion, nucleus	41.18	20.59
CDY46364	Canola	cytosol, mitochondrion, nucleus	41.18	20.29
CDX76421	Canola	cytosol	38.82	20.06
CDX94026	Canola	cytosol, mitochondrion, nucleus	38.24	19.23
CDY58481	Canola	cytosol, mitochondrion, nucleus	37.06	18.64
CDY65341	Canola	plastid	39.41	18.06
CDY22145	Canola	cytosol	38.82	17.23
CDY28007	Canola	cytosol	40.59	17.0
CDY35974	Canola	cytosol	40.59	17.0
CDX74022	Canola	cytosol	35.88	15.89
CDY60369	Canola	cytosol	12.94	11.83
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	39.41	9.5
CDY23476	Canola	cytosol	1.18	1.69

Protein Annotations

EnsemblPlants:CDY16452	EnsemblPlantsGene:GSBRNA2T00091017001	InterPro:C2_dom	InterPro:IPR000008	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310
PFAM:PF00168	PFscan:PS50004	ProteinID:CDY16452	ProteinID:CDY16452.1	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI000254655B	UniProt:A0A078FUD2	MapMan:11.1.2.1.2	:	:	:

Description

BnaA08g03150DBnaA08g03150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUD2]

Coordinates

chrLK032064:+:40374..41835

Molecular Weight (calculated)

19210.4 Da

IEP (calculated)

6.266

GRAVY (calculated)

-0.203

Length

170 amino acids

Sequence
(BLAST)

001: MKPSMMESLL GLLRIRVKRG VNLAVRDLNS SDPYVVVKMG KQKLKTRVIY NDVNPEWNED LTLSVTDPSL KVLLTVYDHD TFTKDDKMGD AEFEIKPYIN
101: ALTMHLQDLP CGTIVTTVQP SRDNCLAEGS RIIWSDGKLV QDIVLRLKHV ECGEVEVQLK WIDLPGSKGL

Best Arabidopsis Sequence Match ( AT1G48590.2 )
(BLAST)

001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.