CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48640	Soybean	cytosol	83.33	96.59
KRH39062	Soybean	cytosol	48.04	89.91
Solyc03g118710.2.1	Tomato	cytosol	64.22	79.39
KRH41845	Soybean	cytosol	63.24	78.18
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	63.24	78.18
KRH60540	Soybean	cytosol	65.69	77.46
PGSC0003DMT400074100	Potato	cytosol	60.29	74.55
Solyc12g040800.1.1	Tomato	cytosol	60.29	74.1
PGSC0003DMT400037472	Potato	cytosol	64.71	72.93
Solyc06g068940.2.1	Tomato	cytosol	58.82	72.73
Bra014145.1-P	Field mustard	mitochondrion	60.29	72.35
CDX77307	Canola	mitochondrion	60.29	72.35
CDY16452	Canola	mitochondrion	60.29	72.35
AT3G17980.1	Thale cress	cytosol	61.27	70.62
CDY51927	Canola	cytosol	61.27	70.62
KRG97928	Soybean	cytosol	56.86	70.3
CDX75953	Canola	cytosol	60.29	69.49
KRH30951	Soybean	cytosol	55.39	68.48
Bra001693.1-P	Field mustard	cytosol	58.82	67.8
GSMUA_Achr10P...	Banana	cytosol	52.45	66.05
AT1G48590.2	Thale cress	cytosol, plasma membrane	60.78	62.0
GSMUA_Achr6P07630_001	Banana	cytosol	50.0	61.45
GSMUA_Achr2P15950_001	Banana	cytosol	51.96	61.27
Os02t0327000-01	Rice	cytosol	48.53	60.0
TraesCS2A01G501300.1	Wheat	mitochondrion	49.02	58.82
EES01097	Sorghum	cytosol	47.55	58.43
HORVU0Hr1G039050.2	Barley	mitochondrion	48.04	57.99
TraesCS2B01G529400.1	Wheat	mitochondrion	48.04	57.65
TraesCS2D01G501800.2	Wheat	mitochondrion	48.04	57.65
KRG89347	Soybean	cytosol	18.63	56.72
Zm00001d011396_P001	Maize	cytosol	48.53	56.25
KRG94240	Soybean	cytosol	45.1	54.44
KRH50393	Soybean	cytosol	44.61	53.53
KRH38191	Soybean	cytosol	47.06	53.33
Zm00001d044179_P001	Maize	cytosol	50.98	51.74
KRG94243	Soybean	cytosol, mitochondrion	42.16	49.43
KRH25661	Soybean	cytosol	14.22	43.94
KRH36617	Soybean	cytosol	32.35	39.76
KRH11612	Soybean	cytosol	32.35	39.76
KRH51202	Soybean	cytosol	31.86	39.16
KRH36796	Soybean	cytosol	33.82	21.3
KRH11784	Soybean	cytosol	33.33	20.99
KRH59111	Soybean	cytosol	33.33	20.73
KRH42994	Soybean	cytosol	32.84	20.43
KRH13401	Soybean	cytosol	35.78	19.84
KRH20756	Soybean	cytosol	35.29	19.57
KRH62915	Soybean	cytosol	33.33	19.37
KRH30029	Soybean	cytosol	36.76	19.18
KRH71995	Soybean	cytosol	1.47	2.75

Protein Annotations

EMBL:ACUP02005912	EnsemblPlants:KRH39078	EnsemblPlantsGene:GLYMA_09G176900	EntrezGene:100810504	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168
PFscan:PS50004	ProteinID:KRH39078	ProteinID:KRH39078.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI00023C99A0	UniProt:I1L460	MapMan:11.1.2.1.2	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:40124340..40125736

Molecular Weight (calculated)

23119.2 Da

IEP (calculated)

6.271

GRAVY (calculated)

-0.140

Length

204 amino acids

Sequence
(BLAST)

001: MGVFCVGCFT ESIILLYNIN IIIIKGKEME ESDSTPKSLM ENLLGLLRVR VKRGVNLAVR DVRSSDPYVV IKMYNQKLKT RVIKKDVNPE WNEDLTLSVI
101: NPNHKIKLTV YDHDTFSKDD KMGDAEFDIF PFIEALKMNL TGLPNGTVVT RIQPSKHNCL ADESCITYSN GKVVQDMILR LQNVECGEVE IQLQWIDLPG
201: SKGL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.