Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g040800.1.1 | Tomato | cytosol | 89.5 | 97.59 |
| PGSC0003DMT400074100 | Potato | cytosol | 76.24 | 83.64 |
| KRH60540 | Soybean | cytosol | 72.38 | 75.72 |
| KRH41845 | Soybean | cytosol | 68.51 | 75.15 |
| CDY51927 | Canola | cytosol | 72.93 | 74.58 |
| KRH48640 | Soybean | cytosol | 72.38 | 74.43 |
| VIT_17s0000g02290.t01 | Wine grape | cytosol, plastid | 74.03 | 74.03 |
| AT3G17980.1 | Thale cress | cytosol | 72.38 | 74.01 |
| CDX75953 | Canola | cytosol | 71.82 | 73.45 |
| Bra001693.1-P | Field mustard | cytosol | 71.27 | 72.88 |
| CDY16452 | Canola | mitochondrion | 67.4 | 71.76 |
| Bra014145.1-P | Field mustard | mitochondrion | 67.4 | 71.76 |
| CDX77307 | Canola | mitochondrion | 66.3 | 70.59 |
| KRH39062 | Soybean | cytosol | 41.44 | 68.81 |
| CDY47746 | Canola | mitochondrion | 61.88 | 66.67 |
| GSMUA_Achr10P... | Banana | cytosol | 59.67 | 66.67 |
| CDX82060 | Canola | mitochondrion | 61.33 | 66.07 |
| Bra008104.1-P | Field mustard | cytosol, mitochondrion | 61.33 | 66.07 |
| AT1G48590.2 | Thale cress | cytosol, plasma membrane | 72.93 | 66.0 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 60.22 | 65.66 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 62.43 | 65.32 |
| KRH39078 | Soybean | endoplasmic reticulum, extracellular | 72.93 | 64.71 |
| AT1G73580.1 | Thale cress | mitochondrion | 59.12 | 63.69 |
| PGSC0003DMT400078786 | Potato | cytosol | 58.01 | 63.64 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 57.46 | 61.54 |
| Os02t0327000-01 | Rice | cytosol | 55.8 | 61.21 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 57.46 | 61.18 |
| EES01097 | Sorghum | cytosol | 54.7 | 59.64 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 55.25 | 58.82 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 55.25 | 58.82 |
| Zm00001d011396_P001 | Maize | cytosol | 55.25 | 56.82 |
| PGSC0003DMT400042134 | Potato | cytosol | 39.23 | 52.59 |
| Zm00001d044179_P001 | Maize | cytosol | 56.91 | 51.24 |
| PGSC0003DMT400020051 | Potato | cytosol | 43.65 | 48.17 |
| PGSC0003DMT400059720 | Potato | cytosol | 44.2 | 47.9 |
| PGSC0003DMT400038836 | Potato | cytosol | 37.57 | 40.24 |
| PGSC0003DMT400034618 | Potato | cytosol | 34.81 | 37.5 |
| PGSC0003DMT400068533 | Potato | cytosol | 38.67 | 17.72 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400037472 | EnsemblPlantsGene:PGSC0003DMG400014458 | EntrezGene:102596202 | InterPro:C2_dom | InterPro:IPR000008 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF310 | PFAM:PF00168 | PFscan:PS50004 | PGSC:PGSC0003DMG400014458 | RefSeq:XP_006346641.1 | SEG:seg |
| SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0002960AFF | UniProt:M1B5G0 | MapMan:11.1.2.1.2 | : |
Description
Pollen-specific C2 domain containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014458]
Coordinates
chr12:-:48566122..48569934
Molecular Weight (calculated)
20145.6 Da
IEP (calculated)
7.294
GRAVY (calculated)
-0.255
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSPGGGGS ATKSLMDNLL GLLRIKIKKG VNLAVRDVRT SDPYCVVKMG KKQKLKTRVI KKDINPEWNE DLTLSVSDPS LPVKLTVYDH DTFSMDDKMG
101: DAEFDIKSFV EALKMNLHGL PSGTVITRVL PCRTNCLAEE SRVIWDDGKV VQDMILRLRN VECGEVELQL QWIDLPGSKI G
101: DAEFDIKSFV EALKMNLHGL PSGTVITRVL PCRTNCLAEE SRVIWDDGKV VQDMILRLRN VECGEVELQL QWIDLPGSKI G
001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL
Arabidopsis Description
CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.