CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60540	Soybean	cytosol	95.15	90.75
Solyc03g118710.2.1	Tomato	cytosol	74.55	74.55
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	73.94	73.94
CDX77307	Canola	mitochondrion	75.76	73.53
Bra014145.1-P	Field mustard	mitochondrion	75.15	72.94
CDY16452	Canola	mitochondrion	75.15	72.94
Solyc12g040800.1.1	Tomato	cytosol	73.33	72.89
CDY51927	Canola	cytosol	78.18	72.88
AT3G17980.1	Thale cress	cytosol	76.97	71.75
CDX75953	Canola	cytosol	76.97	71.75
KRH48640	Soybean	cytosol	76.36	71.59
PGSC0003DMT400074100	Potato	cytosol	71.52	71.52
Solyc06g068940.2.1	Tomato	cytosol	70.91	70.91
KRH39062	Soybean	cytosol	46.67	70.64
Bra001693.1-P	Field mustard	cytosol	74.55	69.49
PGSC0003DMT400037472	Potato	cytosol	75.15	68.51
KRG97928	Soybean	cytosol	67.88	67.88
KRH30951	Soybean	cytosol	66.67	66.67
GSMUA_Achr10P...	Banana	cytosol	63.03	64.2
KRH39078	Soybean	endoplasmic reticulum, extracellular	78.18	63.24
GSMUA_Achr6P07630_001	Banana	cytosol	63.03	62.65
AT1G48590.2	Thale cress	cytosol, plasma membrane	75.15	62.0
GSMUA_Achr2P15950_001	Banana	cytosol	63.64	60.69
Os02t0327000-01	Rice	cytosol	59.39	59.39
EES01097	Sorghum	cytosol	58.79	58.43
KRG89347	Soybean	cytosol	23.03	56.72
TraesCS2A01G501300.1	Wheat	mitochondrion	58.18	56.47
HORVU0Hr1G039050.2	Barley	mitochondrion	57.58	56.21
KRH50393	Soybean	cytosol	57.58	55.88
TraesCS2B01G529400.1	Wheat	mitochondrion	56.97	55.29
TraesCS2D01G501800.2	Wheat	mitochondrion	56.97	55.29
KRG94240	Soybean	cytosol	55.76	54.44
Zm00001d011396_P001	Maize	cytosol	57.58	53.98
KRH38191	Soybean	cytosol	58.18	53.33
Zm00001d044179_P001	Maize	cytosol	61.21	50.25
KRG94243	Soybean	cytosol, mitochondrion	51.52	48.85
KRH25661	Soybean	cytosol	18.18	45.45
KRH36617	Soybean	cytosol	39.39	39.16
KRH11612	Soybean	cytosol	39.39	39.16
KRH51202	Soybean	cytosol	38.79	38.55
KRH59111	Soybean	cytosol	37.58	18.9
KRH42994	Soybean	cytosol	36.97	18.6
KRH36796	Soybean	cytosol	35.76	18.21
KRH11784	Soybean	cytosol	35.76	18.21
KRH62915	Soybean	cytosol	36.97	17.38
KRH13401	Soybean	cytosol	38.18	17.12
KRH30029	Soybean	cytosol	40.0	16.88
KRH20756	Soybean	cytosol	37.58	16.85
KRH71995	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02004781	EnsemblPlants:KRH41845	EnsemblPlantsGene:GLYMA_08G054500	EntrezGene:100799469	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168
PFscan:PS50004	ProteinID:KRH41845	ProteinID:KRH41845.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00018C67B7
UniProt:A0A0R0INE6	MapMan:11.1.2.1.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:4206320..4207616

Molecular Weight (calculated)

18713.7 Da

IEP (calculated)

5.309

GRAVY (calculated)

-0.261

Length

165 amino acids

Sequence
(BLAST)

001: MEDLLGLLRI HIKRGVNLAV RDVNTSDPYV VVKMGKQKLK TRVIKKDVNP EWKEDLTLSV TDPIHPFILT VYDYDTFSKD DKMGDAECDI SAYIEALKMN
101: LEDLPSGTII TRIQPSRQNC LAEESCITYS NGKVIQDLVL RLRHVESGEV EIQLQWINLP GSKGL

Best Arabidopsis Sequence Match ( AT1G48590.2 )
(BLAST)

001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.