Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51927 | Canola | cytosol | 94.92 | 94.92 |
| CDX75953 | Canola | cytosol | 93.22 | 93.22 |
| Bra001693.1-P | Field mustard | cytosol | 92.09 | 92.09 |
| PGSC0003DMT400074100 | Potato | cytosol | 71.75 | 76.97 |
| KRH41845 | Soybean | cytosol | 71.75 | 76.97 |
| KRH60540 | Soybean | cytosol | 74.01 | 75.72 |
| Solyc12g040800.1.1 | Tomato | cytosol | 70.62 | 75.3 |
| Solyc06g068940.2.1 | Tomato | cytosol | 69.49 | 74.55 |
| Solyc03g118720.2.1 | Tomato | cytosol, mitochondrion | 69.49 | 74.55 |
| Solyc03g118710.2.1 | Tomato | cytosol | 69.49 | 74.55 |
| PGSC0003DMT400037472 | Potato | cytosol | 74.01 | 72.38 |
| AT1G48590.2 | Thale cress | cytosol, plasma membrane | 80.79 | 71.5 |
| KRH48640 | Soybean | cytosol | 69.49 | 69.89 |
| AT1G73580.1 | Thale cress | mitochondrion | 65.54 | 69.05 |
| KRH39062 | Soybean | cytosol | 40.68 | 66.06 |
| GSMUA_Achr10P... | Banana | cytosol | 59.32 | 64.81 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 61.02 | 62.43 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 58.19 | 62.05 |
| KRH39078 | Soybean | endoplasmic reticulum, extracellular | 70.62 | 61.27 |
| AT5G37740.2 | Thale cress | cytosol | 61.02 | 60.67 |
| Os02t0327000-01 | Rice | cytosol | 54.8 | 58.79 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 55.93 | 58.24 |
| AT1G70810.1 | Thale cress | cytosol | 54.24 | 58.18 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 55.37 | 57.99 |
| EES01097 | Sorghum | cytosol | 53.67 | 57.23 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 54.24 | 56.47 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 53.67 | 55.88 |
| AT1G66360.1 | Thale cress | cytosol | 54.8 | 55.75 |
| Zm00001d011396_P001 | Maize | cytosol | 53.11 | 53.41 |
| AT1G23140.1 | Thale cress | cytosol, mitochondrion | 49.72 | 53.33 |
| AT1G70790.1 | Thale cress | cytosol | 54.24 | 51.89 |
| AT2G01540.1 | Thale cress | cytosol | 49.15 | 48.33 |
| Zm00001d044179_P001 | Maize | cytosol | 54.8 | 48.26 |
| AT1G70800.1 | Thale cress | cytosol | 46.89 | 47.7 |
| AT5G47710.1 | Thale cress | cytosol | 37.29 | 39.76 |
| AT4G05330.1 | Thale cress | cytosol, mitochondrion, nucleus | 40.68 | 21.43 |
| AT4G21160.4 | Thale cress | cytosol, mitochondrion, nucleus | 38.98 | 20.47 |
| AT3G07940.1 | Thale cress | cytosol | 37.85 | 17.4 |
Protein Annotations
| MapMan:11.1.2.1.2 | Gene3D:2.60.40.150 | PDB:4V29 | PDB:5A4X | PDB:5A50 | PDB:5A51 |
| EntrezGene:821323 | ProteinID:AEE76031.1 | ArrayExpress:AT3G17980 | EnsemblPlantsGene:AT3G17980 | RefSeq:AT3G17980 | TAIR:AT3G17980 |
| RefSeq:AT3G17980-TAIR-G | EnsemblPlants:AT3G17980.1 | TAIR:AT3G17980.1 | ProteinID:BAB02719.1 | EMBL:BT021979 | EMBL:BT030626 |
| InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005543 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009789 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0030234 |
| GO:GO:0043547 | GO:GO:0046872 | GO:GO:1901002 | GO:GO:1902479 | InterPro:IPR000008 | InterPro:IPR035892 |
| RefSeq:NP_188425.2 | PFAM:PF00168 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50004 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF310 | UniProt:Q9LVH4 | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI00000A3BF3 | SEG:seg |
Description
CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
Coordinates
chr3:+:6152062..6153814
Molecular Weight (calculated)
19901.2 Da
IEP (calculated)
5.839
GRAVY (calculated)
-0.228
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.