Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11543 | Canola | cytosol | 71.26 | 75.15 |
| CDX96279 | Canola | cytosol | 71.26 | 75.15 |
| Bra016185.1-P | Field mustard | cytosol | 71.26 | 75.15 |
| AT1G70810.1 | Thale cress | cytosol | 70.69 | 74.55 |
| VIT_01s0011g05230.t01 | Wine grape | cytosol | 57.47 | 60.24 |
| AT1G23140.1 | Thale cress | cytosol, mitochondrion | 56.9 | 60.0 |
| Solyc06g053390.2.1 | Tomato | cytosol, mitochondrion | 52.87 | 55.09 |
| PGSC0003DMT400042134 | Potato | cytosol | 42.53 | 54.81 |
| AT1G70790.1 | Thale cress | cytosol | 55.75 | 52.43 |
| AT5G37740.2 | Thale cress | cytosol | 52.3 | 51.12 |
| AT2G01540.1 | Thale cress | cytosol | 52.87 | 51.11 |
| GSMUA_Achr10P... | Banana | cytosol | 47.13 | 50.62 |
| EES01097 | Sorghum | cytosol | 48.28 | 50.6 |
| Os02t0327000-01 | Rice | cytosol | 47.7 | 50.3 |
| KRG94240 | Soybean | cytosol | 48.28 | 49.7 |
| KRH38191 | Soybean | cytosol | 51.15 | 49.44 |
| KRG94243 | Soybean | cytosol, mitochondrion | 49.43 | 49.43 |
| AT1G73580.1 | Thale cress | mitochondrion | 47.7 | 49.4 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 47.13 | 49.4 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 47.7 | 48.82 |
| KRH50393 | Soybean | cytosol | 47.7 | 48.82 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 47.7 | 48.82 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 48.28 | 48.55 |
| PGSC0003DMT400020051 | Potato | cytosol | 45.4 | 48.17 |
| AT1G66360.1 | Thale cress | cytosol | 47.7 | 47.7 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 46.55 | 47.65 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 45.98 | 47.34 |
| AT3G17980.1 | Thale cress | cytosol | 47.7 | 46.89 |
| PGSC0003DMT400059720 | Potato | cytosol | 44.83 | 46.71 |
| Solyc04g007800.2.1 | Tomato | cytosol | 44.83 | 46.71 |
| KRG89347 | Soybean | cytosol | 17.82 | 46.27 |
| Zm00001d011396_P001 | Maize | cytosol | 45.98 | 45.45 |
| AT1G48590.2 | Thale cress | cytosol, plasma membrane | 51.15 | 44.5 |
| Zm00001d044179_P001 | Maize | cytosol | 45.98 | 39.8 |
| AT5G47710.1 | Thale cress | cytosol | 33.91 | 35.54 |
| AT4G21160.4 | Thale cress | cytosol, mitochondrion, nucleus | 39.08 | 20.18 |
| AT4G05330.1 | Thale cress | cytosol, mitochondrion, nucleus | 38.51 | 19.94 |
| AT3G07940.1 | Thale cress | cytosol | 40.23 | 18.18 |
Protein Annotations
| MapMan:11.1.2.1.2 | Gene3D:2.60.40.150 | EntrezGene:843417 | ProteinID:AAD55495.1 | ProteinID:AAG52328.1 | ProteinID:AEE35118.1 |
| ArrayExpress:AT1G70800 | EnsemblPlantsGene:AT1G70800 | RefSeq:AT1G70800 | TAIR:AT1G70800 | RefSeq:AT1G70800-TAIR-G | EnsemblPlants:AT1G70800.1 |
| TAIR:AT1G70800.1 | EMBL:BT010681 | EMBL:BT010960 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 |
| GO:GO:0005096 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005886 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009630 |
| GO:GO:0009637 | GO:GO:0009638 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009789 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR000008 | InterPro:IPR035892 |
| RefSeq:NP_177237.1 | PFAM:PF00168 | PO:PO:0000293 | PFscan:PS50004 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF296 |
| UniProt:Q9S764 | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI00000A24C0 | SEG:seg | : |
Description
CAR6Protein C2-DOMAIN ABA-RELATED 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S764]
Coordinates
chr1:+:26702493..26703926
Molecular Weight (calculated)
19632.9 Da
IEP (calculated)
4.655
GRAVY (calculated)
-0.346
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTEEEVEM KELVGLVRIL VKRGIDLARR DALSSDPFVV ITMGPQKLKS FTVKNNCNPE WNEELTLAIE DPNEPVKLMV YDKDTFTADD KMGDAQIDMK
101: PFLDVHKLGL KELPHGKELK RIVPTRDNCL SEDSIIVSDN GKIVQDMILL LKNVECGKVE IQLEWLKNPG GSGL
101: PFLDVHKLGL KELPHGKELK RIVPTRDNCL SEDSIIVSDN GKIVQDMILL LKNVECGKVE IQLEWLKNPG GSGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.