Factsheet for HORVU0Hr1G039050.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G045920.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01540.1	HORVU5Hr1G045920.2	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G501300.1	Wheat	mitochondrion	95.86	95.29
TraesCS2B01G529400.1	Wheat	mitochondrion	94.67	94.12
TraesCS2D01G501800.2	Wheat	mitochondrion	94.08	93.53
Os02t0327000-01	Rice	cytosol	77.51	79.39
EES01097	Sorghum	cytosol	77.51	78.92
Zm00001d011396_P001	Maize	cytosol	73.37	70.45
GSMUA_Achr10P...	Banana	cytosol	64.5	67.28
VIT_14s0006g01250.t01	Wine grape	cytosol	62.13	63.64
Zm00001d044179_P001	Maize	cytosol	75.15	63.18
GSMUA_Achr2P15950_001	Banana	cytosol	64.5	63.01
GSMUA_Achr6P07630_001	Banana	cytosol	61.54	62.65
Solyc12g040800.1.1	Tomato	cytosol	60.95	62.05
KRG97928	Soybean	cytosol	60.35	61.82
KRH30951	Soybean	cytosol	59.17	60.61
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	58.58	60.0
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	58.58	60.0
PGSC0003DMT400074100	Potato	cytosol	57.99	59.39
PGSC0003DMT400078786	Potato	cytosol	57.99	59.39
Solyc02g063370.2.1	Tomato	cytosol	57.99	59.04
Solyc03g118710.2.1	Tomato	cytosol	56.8	58.18
Solyc06g068940.2.1	Tomato	cytosol	56.8	58.18
Solyc02g063360.2.1	Tomato	cytosol	56.8	57.83
CDY01709	Canola	mitochondrion	57.4	57.74
KRH41845	Soybean	cytosol	56.21	57.58
PGSC0003DMT400037472	Potato	cytosol	61.54	57.46
Bra014145.1-P	Field mustard	mitochondrion	57.4	57.06
CDX77307	Canola	mitochondrion	57.4	57.06
CDY16452	Canola	mitochondrion	57.4	57.06
Bra018410.1-P	Field mustard	mitochondrion	56.21	56.55
Bra025441.1-P	Field mustard	cytosol	56.21	56.55
Bra028147.1-P	Field mustard	cytosol	56.21	56.55
CDY27005	Canola	cytosol	56.21	56.55
CDY38572	Canola	mitochondrion	56.21	56.55
AT1G70810.1	Thale cress	cytosol	55.03	56.36
CDX99693	Canola	cytosol	55.62	55.95
VIT_17s0000g02290.t01	Wine grape	cytosol, plastid	59.76	55.8
KRH48640	Soybean	cytosol	57.99	55.68
VIT_01s0011g05230.t01	Wine grape	cytosol	54.44	55.42
AT3G17980.1	Thale cress	cytosol	57.99	55.37
CDX75953	Canola	cytosol	57.99	55.37
CDY51927	Canola	cytosol	57.99	55.37
CDX74562	Canola	cytosol	54.44	55.09
KRH60540	Soybean	cytosol	56.21	54.91
Bra028148.1-P	Field mustard	mitochondrion	54.44	54.76
CDX74561	Canola	mitochondrion	54.44	54.76
CDY47746	Canola	mitochondrion	54.44	54.76
CDY71117	Canola	cytosol	51.48	54.38
Bra008104.1-P	Field mustard	cytosol, mitochondrion	53.85	54.17
CDX82060	Canola	mitochondrion	53.85	54.17
AT5G37740.2	Thale cress	cytosol	56.8	53.93
Bra024565.1-P	Field mustard	cytosol	50.89	53.75
CDY04742	Canola	cytosol	50.89	53.75
CDY71433	Canola	cytosol	50.89	53.75
KRG89347	Soybean	cytosol	21.3	53.73
Bra001693.1-P	Field mustard	cytosol	56.21	53.67
CDY27654	Canola	cytosol	56.21	53.07
AT1G23140.1	Thale cress	cytosol, mitochondrion	50.89	52.12
Bra016185.1-P	Field mustard	cytosol	50.3	51.52
CDX96279	Canola	cytosol	50.3	51.52
CDY11543	Canola	cytosol	50.3	51.52
KRH39062	Soybean	cytosol	33.14	51.38
AT1G73580.1	Thale cress	mitochondrion	50.89	51.19
AT1G66360.1	Thale cress	cytosol	52.66	51.15
Bra004161.1-P	Field mustard	cytosol	52.66	50.86
CDX96152	Canola	cytosol	52.66	50.86
CDY07499	Canola	cytosol	52.07	50.29
AT1G48590.2	Thale cress	cytosol, plasma membrane	57.99	49.0
KRH50393	Soybean	cytosol	48.52	48.24
HORVU6Hr1G091350.3	Barley	cytosol, endoplasmic reticulum	47.34	48.19
HORVU6Hr1G091440.1	Barley	cytosol, endoplasmic reticulum	47.34	48.19
KRH39078	Soybean	endoplasmic reticulum, extracellular	57.99	48.04
KRG94240	Soybean	cytosol	47.93	47.93
KRH38191	Soybean	cytosol	50.3	47.22
PGSC0003DMT400020051	Potato	cytosol	45.56	46.95
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	46.15	46.71
CDY11544	Canola	cytosol	50.89	46.49
HORVU2Hr1G063790.1	Barley	cytosol	46.75	46.47
PGSC0003DMT400059720	Potato	cytosol	45.56	46.11
AT1G70800.1	Thale cress	cytosol	47.34	45.98
Bra016186.1-P	Field mustard	cytosol	50.3	45.95
CDX96278	Canola	cytosol	50.3	45.95
PGSC0003DMT400042134	Potato	cytosol	36.69	45.93
Solyc04g007800.2.1	Tomato	cytosol	44.97	45.51
AT1G70790.1	Thale cress	cytosol	49.11	44.86
KRG94243	Soybean	cytosol, mitochondrion	46.15	44.83
Bra024877.1-P	Field mustard	cytosol	46.15	43.33
CDY17665	Canola	cytosol	46.15	43.33
CDY58016	Canola	cytosol	46.15	43.33
AT2G01540.1	Thale cress	cytosol	45.56	42.78
Bra017445.1-P	Field mustard	cytosol	44.97	42.22
CDY04090	Canola	cytosol	44.97	42.22
CDY70365	Canola	cytosol	44.97	42.22
CDY23479	Canola	cytosol	46.15	42.16
Bra026650.1-P	Field mustard	cytosol	44.38	41.67
CDY09436	Canola	cytosol	44.38	41.67
CDY48816	Canola	cytosol	44.38	41.67
CDY23477	Canola	cytosol	26.04	35.2
CDY49631	Canola	extracellular	23.67	33.33
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	45.56	32.63
Bra003941.1-P	Field mustard	cytosol	46.75	31.23
CDY70119	Canola	cytosol	46.75	31.23
HORVU5Hr1G052010.2	Barley	cytosol	39.05	29.2
CDX68329	Canola	cytosol	22.49	27.54
HORVU5Hr1G052030.1	Barley	cytosol	39.05	27.5
Bra003940.1-P	Field mustard	cytosol	22.49	27.14
HORVU2Hr1G048940.1	Barley	cytosol, plastid	17.16	21.17
HORVU6Hr1G032940.1	Barley	cytosol	37.28	19.5
HORVU1Hr1G057260.3	Barley	cytosol	40.24	16.63
HORVU6Hr1G071850.3	Barley	mitochondrion	40.83	15.65
HORVU3Hr1G108480.1	Barley	cytosol	40.83	14.38
CDY23476	Canola	cytosol	0.59	0.85

Protein Annotations

MapMan:11.1.2.1.2	InterPro:C2_dom	GO:GO:0003674	GO:GO:0005096	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0009611	GO:GO:0009628	GO:GO:0009651	GO:GO:0030234	GO:GO:0043547
GO:GO:1901002	GO:GO:1902479	EnsemblPlantsGene:HORVU0Hr1G039050	EnsemblPlants:HORVU0Hr1G039050.2	InterPro:IPR000008	UniProt:M0YX34
PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI000296AB26	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:248023923..248025701

Molecular Weight (calculated)

18806.9 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.150

Length

169 amino acids

Sequence
(BLAST)

001: MLGHLVGLVK VRVTRGVNLA IRDLRSSDPY VVVRMGKQKL KTRVVRKSIN PEWNDELTLS VEDPTVPVKL DVFDKDTFFD DPMGNAELDI GSLVEAARMR
101: VQMQGVDGTV VKKLVPNRQN CLAEESAVYL SEGTVKQDVV LRLRNVECGE VELQLQWIDI PGSKAASGF

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.