Factsheet for Bra028148.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74561	Canola	mitochondrion	100.0	100.0
Bra018410.1-P	Field mustard	mitochondrion	86.31	86.31
Bra028147.1-P	Field mustard	cytosol	83.93	83.93
Bra025441.1-P	Field mustard	cytosol	82.74	82.74
AT5G37740.2	Thale cress	cytosol	82.14	77.53
KRG97928	Soybean	cytosol	66.67	67.88
KRH30951	Soybean	cytosol	66.67	67.88
VIT_14s0006g01250.t01	Wine grape	cytosol	64.88	66.06
Bra004161.1-P	Field mustard	cytosol	67.26	64.57
PGSC0003DMT400078786	Potato	cytosol	61.9	63.03
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	61.9	63.03
Solyc02g063360.2.1	Tomato	cytosol	61.9	62.65
Solyc02g063370.2.1	Tomato	cytosol	61.9	62.65
Bra014145.1-P	Field mustard	mitochondrion	61.31	60.59
Bra008104.1-P	Field mustard	cytosol, mitochondrion	58.93	58.93
Bra001693.1-P	Field mustard	cytosol	61.9	58.76
GSMUA_Achr10P...	Banana	cytosol	54.76	56.79
GSMUA_Achr6P07630_001	Banana	cytosol	55.95	56.63
GSMUA_Achr2P15950_001	Banana	cytosol	57.74	56.07
TraesCS2A01G501300.1	Wheat	mitochondrion	55.95	55.29
Bra016185.1-P	Field mustard	cytosol	54.17	55.15
HORVU0Hr1G039050.2	Barley	mitochondrion	54.76	54.44
TraesCS2D01G501800.2	Wheat	mitochondrion	54.76	54.12
TraesCS2B01G529400.1	Wheat	mitochondrion	54.76	54.12
EES01097	Sorghum	cytosol	52.38	53.01
Os02t0327000-01	Rice	cytosol	51.79	52.73
Bra024565.1-P	Field mustard	cytosol	50.0	52.5
Bra016186.1-P	Field mustard	cytosol	56.55	51.35
Bra024877.1-P	Field mustard	cytosol	54.76	51.11
Bra026650.1-P	Field mustard	cytosol	53.57	50.0
Bra017445.1-P	Field mustard	cytosol	53.57	50.0
Zm00001d011396_P001	Maize	cytosol	51.79	49.43
Zm00001d044179_P001	Maize	cytosol	54.17	45.27
Bra003941.1-P	Field mustard	cytosol	50.6	33.6
Bra003940.1-P	Field mustard	cytosol	23.21	27.86
Bra029572.1-P	Field mustard	cytosol	44.64	27.17
Bra038783.1-P	Field mustard	cytosol	38.69	19.23
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	37.5	18.81
Bra024773.1-P	Field mustard	cytosol	29.76	17.24
Bra013508.1-P	Field mustard	cytosol	39.88	17.05
Bra029688.1-P	Field mustard	cytosol	36.31	15.02
Bra001277.1-P	Field mustard	cytosol	32.74	14.32

Protein Annotations

EnsemblPlants:Bra028148.1	EnsemblPlants:Bra028148.1-P	EnsemblPlantsGene:Bra028148	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00018C67B1	UniProt:M4EH83	MapMan:11.1.2.1.2	:

Description

AT5G37740 (E=3e-077) | C2 domain-containing protein

Coordinates

chrA04:+:6141434..6142966

Molecular Weight (calculated)

19066.1 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.261

Length

168 amino acids

Sequence
(BLAST)

001: MENLLGLLRI HVKRGVNLAI RDIASSDPYI VFHFGNKKLK THVVKQSVNP EWNDDLTLSV TDPNLPVKLT VYDKDLLSAD DKMGEAEFSI APYLEAIKFR
101: HKIQGGLPNG TIIMKIQPNR QNCLSEESHI VWNHGKLVQN MFIRLQNVET GEVELQLEWI DVPGSRGI

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.