Factsheet for Bra024565.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71433	Canola	cytosol	100.0	100.0
CDY04742	Canola	cytosol	100.0	100.0
AT1G23140.1	Thale cress	cytosol, mitochondrion	78.12	75.76
Bra016185.1-P	Field mustard	cytosol	71.88	69.7
VIT_01s0011g05230.t01	Wine grape	cytosol	62.5	60.24
Bra014145.1-P	Field mustard	mitochondrion	58.75	55.29
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	55.0	52.69
GSMUA_Achr10P...	Banana	cytosol	53.12	52.47
EES01097	Sorghum	cytosol	54.38	52.41
Os02t0327000-01	Rice	cytosol	53.75	52.12
Bra016186.1-P	Field mustard	cytosol	60.0	51.89
Bra018410.1-P	Field mustard	mitochondrion	53.75	51.19
KRH50393	Soybean	cytosol	54.38	51.18
PGSC0003DMT400042134	Potato	cytosol	43.12	51.11
HORVU0Hr1G039050.2	Barley	mitochondrion	53.75	50.89
KRG89347	Soybean	cytosol	21.25	50.75
PGSC0003DMT400020051	Potato	cytosol	51.88	50.61
TraesCS2A01G501300.1	Wheat	mitochondrion	53.75	50.59
TraesCS2B01G529400.1	Wheat	mitochondrion	53.75	50.59
TraesCS2D01G501800.2	Wheat	mitochondrion	53.75	50.59
GSMUA_Achr2P15950_001	Banana	cytosol	54.38	50.29
Bra028147.1-P	Field mustard	cytosol	52.5	50.0
Bra028148.1-P	Field mustard	mitochondrion	52.5	50.0
Bra008104.1-P	Field mustard	cytosol, mitochondrion	52.5	50.0
Solyc04g007800.2.1	Tomato	cytosol	51.88	49.7
Bra025441.1-P	Field mustard	cytosol	51.88	49.4
Bra001693.1-P	Field mustard	cytosol	54.38	49.15
PGSC0003DMT400059720	Potato	cytosol	51.25	49.1
KRG94243	Soybean	cytosol, mitochondrion	53.12	48.85
GSMUA_Achr6P07630_001	Banana	cytosol	50.62	48.8
Bra004161.1-P	Field mustard	cytosol	53.12	48.57
KRG94240	Soybean	cytosol	51.25	48.52
Bra024877.1-P	Field mustard	cytosol	54.38	48.33
KRH38191	Soybean	cytosol	54.38	48.33
Bra017445.1-P	Field mustard	cytosol	54.38	48.33
Bra026650.1-P	Field mustard	cytosol	53.75	47.78
Zm00001d011396_P001	Maize	cytosol	51.25	46.59
Zm00001d044179_P001	Maize	cytosol	56.25	44.78
Bra003941.1-P	Field mustard	cytosol	53.75	33.99
Bra003940.1-P	Field mustard	cytosol	27.5	31.43
Bra029572.1-P	Field mustard	cytosol	41.88	24.28
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	37.5	17.91
Bra038783.1-P	Field mustard	cytosol	37.5	17.75
Bra013508.1-P	Field mustard	cytosol	37.5	15.27
Bra024773.1-P	Field mustard	cytosol	26.88	14.83
Bra029688.1-P	Field mustard	cytosol	37.5	14.78
Bra001277.1-P	Field mustard	cytosol	33.75	14.06

Protein Annotations

EnsemblPlants:Bra024565.1	EnsemblPlants:Bra024565.1-P	EnsemblPlantsGene:Bra024565	Gene3D:2.60.40.150	GO:GO:0005575	GO:GO:0005576
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0048046	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF296	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002542A07	UniProt:M4E710	MapMan:11.1.2.1.2	:

Description

AT1G23140 (E=4e-069) | C2 domain-containing protein

Coordinates

chrA09:+:24367642..24368290

Molecular Weight (calculated)

18267.8 Da

IEP (calculated)

4.726

GRAVY (calculated)

-0.449

Length

160 amino acids

Sequence
(BLAST)

001: MEDLVGLLRI RVKRGMNLVS RDSQSSDPFV VVTMGSQTLK THRVENNCNP EWNDELTLAF NDHNQPVILE VYDKDTFTSH DKMGDAEIDI RPFLEIQAMG
101: LQELPDGTEV KRVKPSTDNC LAQESRITFS NGKIVQDMIL KLRNVQSGEV EIQIQWIRVP

Best Arabidopsis Sequence Match ( AT1G23140.1 )
(BLAST)

001: MENLVGLLRI RVKRGINLVS RDSNTSDPFV VVTMGSQKLK TRGVENSCNP EWDDELTLGI NDPNQHVTLE VYDKDTFTSH DPMGDAEIDI KPFFEVQGTD
101: IQELTNGTEI RRVKPSGDNC LAEESRIIFS NGKILQDMIL QLRNVESGEV EIQIEWINVT GSSDF

Arabidopsis Description

CAR8Protein C2-DOMAIN ABA-RELATED 8 [Source:UniProtKB/Swiss-Prot;Acc:O49303]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.