Factsheet for Bra008104.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47746	Canola	mitochondrion	99.4	99.4
AT1G73580.1	Thale cress	mitochondrion	91.07	91.07
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	69.05	70.3
Solyc03g118710.2.1	Tomato	cytosol	68.45	69.7
VIT_17s0000g02290.t01	Wine grape	cytosol, plastid	72.62	67.4
PGSC0003DMT400074100	Potato	cytosol	64.29	65.45
Solyc12g040800.1.1	Tomato	cytosol	63.1	63.86
Bra001693.1-P	Field mustard	cytosol	67.26	63.84
Solyc06g068940.2.1	Tomato	cytosol	62.5	63.64
Bra014145.1-P	Field mustard	mitochondrion	64.29	63.53
PGSC0003DMT400037472	Potato	cytosol	66.07	61.33
GSMUA_Achr6P07630_001	Banana	cytosol	59.52	60.24
GSMUA_Achr10P...	Banana	cytosol	57.74	59.88
Bra018410.1-P	Field mustard	mitochondrion	59.52	59.52
GSMUA_Achr2P15950_001	Banana	cytosol	60.71	58.96
Bra028147.1-P	Field mustard	cytosol	58.93	58.93
Bra028148.1-P	Field mustard	mitochondrion	58.93	58.93
Bra025441.1-P	Field mustard	cytosol	57.74	57.74
TraesCS2A01G501300.1	Wheat	mitochondrion	54.76	54.12
Bra016186.1-P	Field mustard	cytosol	59.52	54.05
Bra016185.1-P	Field mustard	cytosol	52.98	53.94
HORVU0Hr1G039050.2	Barley	mitochondrion	54.17	53.85
Bra004161.1-P	Field mustard	cytosol	55.95	53.71
EES01097	Sorghum	cytosol	52.98	53.61
TraesCS2B01G529400.1	Wheat	mitochondrion	54.17	53.53
TraesCS2D01G501800.2	Wheat	mitochondrion	53.57	52.94
Os02t0327000-01	Rice	cytosol	51.79	52.73
Bra024565.1-P	Field mustard	cytosol	50.0	52.5
Zm00001d011396_P001	Maize	cytosol	54.76	52.27
Bra017445.1-P	Field mustard	cytosol	51.19	47.78
Bra024877.1-P	Field mustard	cytosol	51.19	47.78
Bra026650.1-P	Field mustard	cytosol	50.0	46.67
Zm00001d044179_P001	Maize	cytosol	54.17	45.27
Bra003941.1-P	Field mustard	cytosol	55.36	36.76
Bra003940.1-P	Field mustard	cytosol	27.38	32.86
Bra029572.1-P	Field mustard	cytosol	42.26	25.72
Bra038783.1-P	Field mustard	cytosol	40.48	20.12
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	39.29	19.7
Bra024773.1-P	Field mustard	cytosol	32.14	18.62
Bra013508.1-P	Field mustard	cytosol	40.48	17.3
Bra029688.1-P	Field mustard	cytosol	39.88	16.5
Bra001277.1-P	Field mustard	cytosol	36.9	16.15

Protein Annotations

EnsemblPlants:Bra008104.1	EnsemblPlants:Bra008104.1-P	EnsemblPlantsGene:Bra008104	InterPro:C2_dom	InterPro:IPR000008	PANTHER:PTHR23180
PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004	PRINTS:PR00360	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI00025455B2	UniProt:M4CV58	MapMan:11.1.2.1.2	:	:	:

Description

AT1G73580 (E=1e-086) | C2 domain-containing protein

Coordinates

chrA02:+:13140839..13141639

Molecular Weight (calculated)

19240.3 Da

IEP (calculated)

6.534

GRAVY (calculated)

-0.307

Length

168 amino acids

Sequence
(BLAST)

001: MSLMDNLLGI LRVRVKRGVN LAVRDVSSSD PYVVLKLGRQ KLKTKVVKKN INPQWEEDLT FTVTDPNLPL NLVVYDHDFF SKDDKMGDAQ IDLKPYIEAL
101: RMELSGLPDG TIISTIHPNR SNCLAEESYI RWSNDRIVQS FCLRLRNVER GEVELELQWI DLPGSKGL

Best Arabidopsis Sequence Match ( AT1G73580.1 )
(BLAST)

001: MSLMDNLLGI LRVRVQRGVN LAVRDVSSSD PYVVLKLGRQ KLKTKVVKQN VNPQWQEDLS FTVTDPNLPL TLIVYDHDFF SKDDKMGDAE IDLKPYIEAL
101: RMELSGLPDG TIISTIGPSR GNCLAEESYI RWINDRIVQH ICLRLRNVER GEVEIELQWI DLPGSKGL

Arabidopsis Description

CAR3Protein C2-DOMAIN ABA-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.