Factsheet for Bra004161.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07499	Canola	cytosol	99.43	99.43
CDX96152	Canola	cytosol	98.29	98.29
AT1G66360.1	Thale cress	cytosol	86.86	87.36
Bra018410.1-P	Field mustard	mitochondrion	65.71	68.45
Bra028147.1-P	Field mustard	cytosol	65.14	67.86
Bra028148.1-P	Field mustard	mitochondrion	64.57	67.26
VIT_14s0006g01250.t01	Wine grape	cytosol	62.86	66.67
KRG97928	Soybean	cytosol	62.29	66.06
KRH30951	Soybean	cytosol	61.71	65.45
Bra025441.1-P	Field mustard	cytosol	61.71	64.29
PGSC0003DMT400078786	Potato	cytosol	60.57	64.24
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	60.57	64.24
Solyc02g063360.2.1	Tomato	cytosol	60.57	63.86
Solyc02g063370.2.1	Tomato	cytosol	60.0	63.25
GSMUA_Achr10P...	Banana	cytosol	53.71	58.02
GSMUA_Achr6P07630_001	Banana	cytosol	53.71	56.63
Bra016185.1-P	Field mustard	cytosol	53.14	56.36
Bra008104.1-P	Field mustard	cytosol, mitochondrion	53.71	55.95
Bra014145.1-P	Field mustard	mitochondrion	54.29	55.88
GSMUA_Achr2P15950_001	Banana	cytosol	53.14	53.76
Bra001693.1-P	Field mustard	cytosol	54.29	53.67
Bra024565.1-P	Field mustard	cytosol	48.57	53.12
TraesCS2B01G529400.1	Wheat	mitochondrion	51.43	52.94
HORVU0Hr1G039050.2	Barley	mitochondrion	50.86	52.66
Bra016186.1-P	Field mustard	cytosol	55.43	52.43
EES01097	Sorghum	cytosol	49.71	52.41
TraesCS2D01G501800.2	Wheat	mitochondrion	50.86	52.35
TraesCS2A01G501300.1	Wheat	mitochondrion	50.86	52.35
Os02t0327000-01	Rice	cytosol	49.14	52.12
Bra024877.1-P	Field mustard	cytosol	53.14	51.67
Bra026650.1-P	Field mustard	cytosol	52.0	50.56
Bra017445.1-P	Field mustard	cytosol	52.0	50.56
Zm00001d011396_P001	Maize	cytosol	48.57	48.3
Zm00001d044179_P001	Maize	cytosol	49.71	43.28
Bra003941.1-P	Field mustard	cytosol	50.86	35.18
Bra003940.1-P	Field mustard	cytosol	21.71	27.14
Bra029572.1-P	Field mustard	cytosol	40.57	25.72
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	40.0	20.9
Bra038783.1-P	Field mustard	cytosol	38.29	19.82
Bra029688.1-P	Field mustard	cytosol	39.43	17.0
Bra013508.1-P	Field mustard	cytosol	37.71	16.79
Bra024773.1-P	Field mustard	cytosol	26.86	16.21
Bra001277.1-P	Field mustard	cytosol	35.43	16.15

Protein Annotations

EnsemblPlants:Bra004161.1	EnsemblPlants:Bra004161.1-P	EnsemblPlantsGene:Bra004161	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004
PRINTS:PR00360	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00025414F5	UniProt:M4CIX7	MapMan:11.1.2.1.2

Description

AT1G66360 (E=3e-083) | C2 domain-containing protein

Coordinates

chrA07:+:17143688..17144769

Molecular Weight (calculated)

20301.6 Da

IEP (calculated)

5.323

GRAVY (calculated)

-0.251

Length

175 amino acids

Sequence
(BLAST)

001: MENMLGLLRL HVIRGVNLAI RDSKSSDPYV IVRMGQQKLR TRVVKKNLNP EWNEDLTLSI SDPVLPIKIM VYDRDWFSRD DKMGDAFFHI DPFLEAIRIQ
101: NQFRGLPEGT VIMKIQASRQ NCLSEESKIV WNNGKIVQNM FLKLQNVECG EVELQLEWID VSGLLSINEH EDVAY

Best Arabidopsis Sequence Match ( AT1G66360.1 )
(BLAST)

001: MENMLGLLRL HVIRGVNLAI RDSQSSDPYV IVRMGKQKLR TRVMKKNLNT EWNEDLTLSV TDPTLPVKIM VYDRDRFSRD DKMGDAIFHI DPFLEAIRIQ
101: NQLGGLPEGT VIMKIQASRQ NCLSEESKIV WHKGKIVQNM FLKLQNVERG EIELQLEWID VSGALTDDAE DVAF

Arabidopsis Description

CAR2Protein C2-DOMAIN ABA-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.