Factsheet for Bra028147.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74562	Canola	cytosol	98.21	98.8
Bra018410.1-P	Field mustard	mitochondrion	88.1	88.1
Bra028148.1-P	Field mustard	mitochondrion	83.93	83.93
Bra025441.1-P	Field mustard	cytosol	82.74	82.74
AT5G37740.2	Thale cress	cytosol	83.93	79.21
KRH30951	Soybean	cytosol	66.07	67.27
KRG97928	Soybean	cytosol	66.07	67.27
VIT_14s0006g01250.t01	Wine grape	cytosol	64.29	65.45
Bra004161.1-P	Field mustard	cytosol	67.86	65.14
PGSC0003DMT400078786	Potato	cytosol	62.5	63.64
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	62.5	63.64
Bra014145.1-P	Field mustard	mitochondrion	63.69	62.94
Solyc02g063370.2.1	Tomato	cytosol	60.12	60.84
Solyc02g063360.2.1	Tomato	cytosol	60.12	60.84
Bra001693.1-P	Field mustard	cytosol	63.1	59.89
Bra008104.1-P	Field mustard	cytosol, mitochondrion	58.93	58.93
GSMUA_Achr10P...	Banana	cytosol	55.36	57.41
TraesCS2A01G501300.1	Wheat	mitochondrion	57.74	57.06
Bra016185.1-P	Field mustard	cytosol	55.95	56.97
GSMUA_Achr6P07630_001	Banana	cytosol	55.95	56.63
HORVU0Hr1G039050.2	Barley	mitochondrion	56.55	56.21
GSMUA_Achr2P15950_001	Banana	cytosol	57.74	56.07
TraesCS2D01G501800.2	Wheat	mitochondrion	56.55	55.88
TraesCS2B01G529400.1	Wheat	mitochondrion	56.55	55.88
Os02t0327000-01	Rice	cytosol	53.57	54.55
EES01097	Sorghum	cytosol	52.98	53.61
Bra024877.1-P	Field mustard	cytosol	57.14	53.33
Bra026650.1-P	Field mustard	cytosol	56.55	52.78
Bra017445.1-P	Field mustard	cytosol	56.55	52.78
Bra024565.1-P	Field mustard	cytosol	50.0	52.5
Bra016186.1-P	Field mustard	cytosol	57.14	51.89
Zm00001d011396_P001	Maize	cytosol	51.19	48.86
Zm00001d044179_P001	Maize	cytosol	52.98	44.28
Bra003941.1-P	Field mustard	cytosol	51.19	33.99
Bra029572.1-P	Field mustard	cytosol	45.83	27.9
Bra003940.1-P	Field mustard	cytosol	23.21	27.86
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	39.29	19.7
Bra024773.1-P	Field mustard	cytosol	33.93	19.66
Bra038783.1-P	Field mustard	cytosol	39.29	19.53
Bra013508.1-P	Field mustard	cytosol	40.48	17.3
Bra029688.1-P	Field mustard	cytosol	38.69	16.01
Bra001277.1-P	Field mustard	cytosol	34.52	15.1

Protein Annotations

EnsemblPlants:Bra028147.1	EnsemblPlants:Bra028147.1-P	EnsemblPlantsGene:Bra028147	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00025443D2	UniProt:M4EH82	MapMan:11.1.2.1.2	:

Description

AT5G37740 (E=2e-080) | C2 domain-containing protein

Coordinates

chrA04:+:6121451..6122364

Molecular Weight (calculated)

19043.0 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.198

Length

168 amino acids

Sequence
(BLAST)

001: MENLLGLLRI HVKRGVNLAI RDISSSDPYV VVHSGKQKLK TRVVKHSLNP DWNDHLTLSV TDPNLPVKLT VYDYDLLSAD DKMGEAEFNI AAYLEAIKFR
101: YALEGGLPDG TIIMKIQPSR QNCLSEESHI VWNQGKLVQN MFLRLQHVEC GEVEIHLEWI DIPGSRGI

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.