CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028147.1-P	Field mustard	cytosol	98.8	98.21
CDY01709	Canola	mitochondrion	94.61	94.05
CDY38572	Canola	mitochondrion	86.83	86.31
CDY27005	Canola	cytosol	85.63	85.12
CDX74561	Canola	mitochondrion	82.63	82.14
CDX99693	Canola	cytosol	80.24	79.76
AT5G37740.2	Thale cress	cytosol	82.63	77.53
CDY27654	Canola	cytosol	82.04	76.54
KRG97928	Soybean	cytosol	64.67	65.45
KRH30951	Soybean	cytosol	64.67	65.45
VIT_14s0006g01250.t01	Wine grape	cytosol	62.87	63.64
CDX96152	Canola	cytosol	65.87	62.86
CDY07499	Canola	cytosol	65.87	62.86
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	61.68	62.42
PGSC0003DMT400078786	Potato	cytosol	61.68	62.42
CDY16452	Canola	mitochondrion	62.28	61.18
CDX77307	Canola	mitochondrion	62.28	61.18
Solyc02g063370.2.1	Tomato	cytosol	59.28	59.64
Solyc02g063360.2.1	Tomato	cytosol	59.28	59.64
CDY51927	Canola	cytosol	62.87	59.32
CDX75953	Canola	cytosol	61.68	58.19
CDY47746	Canola	mitochondrion	58.08	57.74
CDX82060	Canola	mitochondrion	58.08	57.74
CDX96279	Canola	cytosol	55.09	55.76
CDY11543	Canola	cytosol	55.09	55.76
GSMUA_Achr10P...	Banana	cytosol	53.89	55.56
TraesCS2A01G501300.1	Wheat	mitochondrion	56.29	55.29
GSMUA_Achr6P07630_001	Banana	cytosol	54.49	54.82
HORVU0Hr1G039050.2	Barley	mitochondrion	55.09	54.44
GSMUA_Achr2P15950_001	Banana	cytosol	56.29	54.34
TraesCS2B01G529400.1	Wheat	mitochondrion	55.09	54.12
TraesCS2D01G501800.2	Wheat	mitochondrion	55.09	54.12
CDY71117	Canola	cytosol	50.9	53.12
Os02t0327000-01	Rice	cytosol	52.1	52.73
CDY17665	Canola	cytosol	56.29	52.22
CDY58016	Canola	cytosol	56.29	52.22
CDY71433	Canola	cytosol	49.7	51.88
CDY04742	Canola	cytosol	49.7	51.88
EES01097	Sorghum	cytosol	51.5	51.81
CDY09436	Canola	cytosol	55.69	51.67
CDY48816	Canola	cytosol	55.69	51.67
CDY04090	Canola	cytosol	55.69	51.67
CDY11544	Canola	cytosol	56.89	51.35
CDY70365	Canola	cytosol	55.09	51.11
CDX96278	Canola	cytosol	56.29	50.81
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	71.26	50.42
Zm00001d011396_P001	Maize	cytosol	50.3	47.73
CDY49631	Canola	extracellular	33.53	46.67
CDY23479	Canola	cytosol	50.9	45.95
Zm00001d044179_P001	Maize	cytosol	51.5	42.79
CDY23477	Canola	cytosol	29.34	39.2
CDY69110	Canola	cytosol	19.76	35.11
CDY40545	Canola	endoplasmic reticulum, extracellular	39.52	33.33
CDY70119	Canola	cytosol	50.3	33.2
CDX68329	Canola	cytosol	22.75	27.54
CDY62002	Canola	mitochondrion	45.51	22.55
CDY21329	Canola	mitochondrion	45.51	22.55
CDY39164	Canola	cytosol, mitochondrion, nucleus	44.91	22.06
CDY46364	Canola	cytosol, mitochondrion, nucleus	44.91	21.74
CDX82807	Canola	cytosol	40.12	21.2
CDX76421	Canola	cytosol	41.32	20.97
CDX94026	Canola	cytosol, mitochondrion, nucleus	38.92	19.23
CDY58481	Canola	cytosol, mitochondrion, nucleus	38.32	18.93
CDY65341	Canola	plastid	41.92	18.87
CDY22145	Canola	cytosol	38.32	16.71
CDY28007	Canola	cytosol	38.32	15.76
CDY35974	Canola	cytosol	37.72	15.52
CDX74022	Canola	cytosol	33.53	14.58
CDY60369	Canola	cytosol	13.17	11.83
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	40.72	9.65
CDY23476	Canola	cytosol	0.6	0.85

Protein Annotations

EnsemblPlants:CDX74562	EnsemblPlantsGene:GSBRNA2T00114499001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004	ProteinID:CDX74562
ProteinID:CDX74562.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EEEBB4	MapMan:11.1.2.1.2	:

Description

BnaA04g08270D

Coordinates

chrLK031801:-:1475554..1476794

Molecular Weight (calculated)

18926.9 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.213

Length

167 amino acids

Sequence
(BLAST)

001: MENLLGLLRI HVKRGPALIR DISSSDPYVV VHSGKQKLKT RVVKHSLNPD WNDHLTLSVT DPNLPVKLTV YDYDLLSADD KMGEAEFNIA AYLEAIKFRY
101: ALEGGLPDGT IIMKIQPSRQ NCLSEESHIV WNQGKLVQNM FLRLQHVECG EVEIHLEWID IPGSRGI

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.