Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74561 | Canola | mitochondrion | 58.05 | 81.55 |
| CDY38572 | Canola | mitochondrion | 51.69 | 72.62 |
| CDY27005 | Canola | cytosol | 51.69 | 72.62 |
| CDY01709 | Canola | mitochondrion | 50.85 | 71.43 |
| CDX74562 | Canola | cytosol | 50.42 | 71.26 |
| CDX99693 | Canola | cytosol | 49.58 | 69.64 |
| CDY27654 | Canola | cytosol | 51.69 | 68.16 |
| AT5G37740.2 | Thale cress | cytosol | 50.0 | 66.29 |
| VIT_14s0006g01250.t01 | Wine grape | cytosol | 38.98 | 55.76 |
| KRH30951 | Soybean | cytosol | 38.56 | 55.15 |
| KRG97928 | Soybean | cytosol | 38.14 | 54.55 |
| Solyc02g091520.2.1 | Tomato | cytosol, mitochondrion | 37.29 | 53.33 |
| PGSC0003DMT400078786 | Potato | cytosol | 37.29 | 53.33 |
| CDX96152 | Canola | cytosol | 39.41 | 53.14 |
| CDY07499 | Canola | cytosol | 38.98 | 52.57 |
| Solyc02g063360.2.1 | Tomato | cytosol | 36.02 | 51.2 |
| Solyc02g063370.2.1 | Tomato | cytosol | 35.59 | 50.6 |
| CDX77307 | Canola | mitochondrion | 36.02 | 50.0 |
| CDY16452 | Canola | mitochondrion | 36.02 | 50.0 |
| CDX82060 | Canola | mitochondrion | 35.17 | 49.4 |
| CDY47746 | Canola | mitochondrion | 34.75 | 48.81 |
| CDY51927 | Canola | cytosol | 36.44 | 48.59 |
| CDX75953 | Canola | cytosol | 35.59 | 47.46 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 34.75 | 47.4 |
| GSMUA_Achr10P... | Banana | cytosol | 32.2 | 46.91 |
| CDX96279 | Canola | cytosol | 32.2 | 46.06 |
| CDY11543 | Canola | cytosol | 32.2 | 46.06 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 33.05 | 45.88 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 33.05 | 45.88 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 32.2 | 45.78 |
| CDY71117 | Canola | cytosol | 30.93 | 45.62 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 32.63 | 45.56 |
| Os02t0327000-01 | Rice | cytosol | 31.78 | 45.45 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 32.63 | 45.29 |
| CDY71433 | Canola | cytosol | 30.08 | 44.38 |
| CDY04742 | Canola | cytosol | 30.08 | 44.38 |
| EES01097 | Sorghum | cytosol | 30.93 | 43.98 |
| CDY49631 | Canola | extracellular | 22.03 | 43.33 |
| CDY11544 | Canola | cytosol | 32.63 | 41.62 |
| Zm00001d011396_P001 | Maize | cytosol | 30.93 | 41.48 |
| CDX96278 | Canola | cytosol | 32.2 | 41.08 |
| CDY09436 | Canola | cytosol | 30.93 | 40.56 |
| CDY48816 | Canola | cytosol | 30.93 | 40.56 |
| CDY04090 | Canola | cytosol | 30.93 | 40.56 |
| CDY58016 | Canola | cytosol | 30.93 | 40.56 |
| CDY17665 | Canola | cytosol | 30.93 | 40.56 |
| CDY70365 | Canola | cytosol | 30.08 | 39.44 |
| CDY23477 | Canola | cytosol | 20.76 | 39.2 |
| Zm00001d044179_P001 | Maize | cytosol | 32.63 | 38.31 |
| CDY23479 | Canola | cytosol | 29.66 | 37.84 |
| CDY70119 | Canola | cytosol | 29.66 | 27.67 |
| CDX68329 | Canola | cytosol | 15.68 | 26.81 |
| CDY40545 | Canola | endoplasmic reticulum, extracellular | 22.46 | 26.77 |
| CDY69110 | Canola | cytosol | 9.32 | 23.4 |
| CDY62002 | Canola | mitochondrion | 25.42 | 17.8 |
| CDY21329 | Canola | mitochondrion | 25.42 | 17.8 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 25.42 | 17.65 |
| CDX82807 | Canola | cytosol | 23.31 | 17.41 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 25.42 | 17.39 |
| CDX76421 | Canola | cytosol | 23.73 | 17.02 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 22.46 | 15.68 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 22.03 | 15.38 |
| CDY65341 | Canola | plastid | 23.73 | 15.09 |
| CDY22145 | Canola | cytosol | 22.03 | 13.58 |
| CDY28007 | Canola | cytosol | 21.61 | 12.56 |
| CDY35974 | Canola | cytosol | 21.19 | 12.32 |
| CDX74022 | Canola | cytosol | 18.64 | 11.46 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 23.73 | 7.94 |
| CDY60369 | Canola | cytosol | 4.66 | 5.91 |
| CDY23476 | Canola | cytosol | 0.42 | 0.85 |
Protein Annotations
| EnsemblPlants:CDY01706 | EnsemblPlantsGene:GSBRNA2T00112799001 | Gene3D:2.60.40.150 | GO:A0A078EKN0 | InterPro:C2_dom | InterPro:C2_domain_sf |
| InterPro:IPR000008 | InterPro:IPR035892 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF375 | PFAM:PF00168 | PFscan:PS50004 |
| ProteinID:CDY01706 | ProteinID:CDY01706.1 | SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | TMHMM:TMhelix |
| UniParc:UPI0004EED45F | MapMan:11.1.2.1.2 | : | : | : | : |
Description
BnaC04g30460D
Coordinates
chrLK031928:-:706506..708297
Molecular Weight (calculated)
27425.7 Da
IEP (calculated)
9.965
GRAVY (calculated)
0.024
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSWVGDALR NLKDRRFIFS VKWRRTHVIF FWVNLQNSTF LKQKLDLVLF LSFFSLLFLC KKKKLRLCSY LWSFYHVINW NIGTLLLLTP SISLLSVNIN
101: ALLLIKLKTH VVKQSVNPEW NDDLTLSVTD PNLPVKLTVY DKDLLSADDK MGEAEFSIAP YLEAIKFRHK IQGGLPHGTI IMKIQPNRQN CLSEESHIVW
201: NQGKLVQNMF IRLQNVETGE VELQLEWIDV PGSRGV
101: ALLLIKLKTH VVKQSVNPEW NDDLTLSVTD PNLPVKLTVY DKDLLSADDK MGEAEFSIAP YLEAIKFRHK IQGGLPHGTI IMKIQPNRQN CLSEESHIVW
201: NQGKLVQNMF IRLQNVETGE VELQLEWIDV PGSRGV
001: MENMLGLLRL HVIRGVNLAI RDSQSSDPYV IVRMGKQKLR TRVMKKNLNT EWNEDLTLSV TDPTLPVKIM VYDRDRFSRD DKMGDAIFHI DPFLEAIRIQ
101: NQLGGLPEGT VIMKIQASRQ NCLSEESKIV WHKGKIVQNM FLKLQNVERG EIELQLEWID VSGALTDDAE DVAF
101: NQLGGLPEGT VIMKIQASRQ NCLSEESKIV WHKGKIVQNM FLKLQNVERG EIELQLEWID VSGALTDDAE DVAF
Arabidopsis Description
CAR2Protein C2-DOMAIN ABA-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.