CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018410.1-P	Field mustard	mitochondrion	98.81	98.81
CDY38572	Canola	mitochondrion	98.81	98.81
CDY01709	Canola	mitochondrion	86.9	86.9
CDX74561	Canola	mitochondrion	86.31	86.31
CDX74562	Canola	cytosol	85.12	85.63
CDX99693	Canola	cytosol	83.93	83.93
CDY27654	Canola	cytosol	85.71	80.45
AT5G37740.2	Thale cress	cytosol	81.55	76.97
KRH30951	Soybean	cytosol	67.26	68.48
KRG97928	Soybean	cytosol	67.26	68.48
Solyc02g063360.2.1	Tomato	cytosol	64.88	65.66
VIT_14s0006g01250.t01	Wine grape	cytosol	63.69	64.85
CDY16452	Canola	mitochondrion	65.48	64.71
CDX77307	Canola	mitochondrion	65.48	64.71
CDY07499	Canola	cytosol	67.26	64.57
CDX96152	Canola	cytosol	67.26	64.57
Solyc02g063370.2.1	Tomato	cytosol	63.69	64.46
PGSC0003DMT400078786	Potato	cytosol	63.1	64.24
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	62.5	63.64
CDY51927	Canola	cytosol	66.07	62.71
CDX75953	Canola	cytosol	64.88	61.58
CDX82060	Canola	mitochondrion	60.12	60.12
CDY47746	Canola	mitochondrion	59.52	59.52
GSMUA_Achr6P07630_001	Banana	cytosol	58.33	59.04
GSMUA_Achr10P...	Banana	cytosol	56.55	58.64
GSMUA_Achr2P15950_001	Banana	cytosol	58.93	57.23
TraesCS2A01G501300.1	Wheat	mitochondrion	57.14	56.47
CDX96279	Canola	cytosol	55.36	56.36
CDY11543	Canola	cytosol	55.36	56.36
Os02t0327000-01	Rice	cytosol	55.36	56.36
HORVU0Hr1G039050.2	Barley	mitochondrion	56.55	56.21
CDY71117	Canola	cytosol	52.98	55.62
TraesCS2B01G529400.1	Wheat	mitochondrion	55.95	55.29
TraesCS2D01G501800.2	Wheat	mitochondrion	55.95	55.29
CDY11544	Canola	cytosol	60.71	55.14
EES01097	Sorghum	cytosol	54.17	54.82
CDX96278	Canola	cytosol	60.12	54.59
CDY71433	Canola	cytosol	51.79	54.38
CDY04742	Canola	cytosol	51.79	54.38
CDY04090	Canola	cytosol	56.55	52.78
CDY58016	Canola	cytosol	55.95	52.22
CDY17665	Canola	cytosol	55.95	52.22
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	72.62	51.69
CDY48816	Canola	cytosol	55.36	51.67
CDY09436	Canola	cytosol	55.36	51.67
CDY70365	Canola	cytosol	55.36	51.67
Zm00001d011396_P001	Maize	cytosol	53.57	51.14
CDY23479	Canola	cytosol	54.76	49.73
CDY49631	Canola	extracellular	34.52	48.33
Zm00001d044179_P001	Maize	cytosol	55.95	46.77
CDY23477	Canola	cytosol	29.76	40.0
CDY70119	Canola	cytosol	54.17	35.97
CDY40545	Canola	endoplasmic reticulum, extracellular	41.67	35.35
CDY69110	Canola	cytosol	19.64	35.11
CDX68329	Canola	cytosol	22.62	27.54
CDY62002	Canola	mitochondrion	43.45	21.66
CDY21329	Canola	mitochondrion	43.45	21.66
CDY39164	Canola	cytosol, mitochondrion, nucleus	42.86	21.18
CDY46364	Canola	cytosol, mitochondrion, nucleus	42.86	20.87
CDX82807	Canola	cytosol	38.69	20.57
CDX76421	Canola	cytosol	39.88	20.36
CDX94026	Canola	cytosol, mitochondrion, nucleus	37.5	18.64
CDY58481	Canola	cytosol, mitochondrion, nucleus	36.9	18.34
CDY65341	Canola	plastid	40.48	18.33
CDY22145	Canola	cytosol	41.07	18.02
CDY28007	Canola	cytosol	40.48	16.75
CDY35974	Canola	cytosol	39.88	16.5
CDX74022	Canola	cytosol	36.31	15.89
CDY60369	Canola	cytosol	13.1	11.83
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	39.29	9.36
CDY23476	Canola	cytosol	0.6	0.85

Protein Annotations

EnsemblPlants:CDY27005	EnsemblPlantsGene:GSBRNA2T00036795001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004	ProteinID:CDY27005
ProteinID:CDY27005.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EE9B00	UniProt:A0A078GKB7	MapMan:11.1.2.1.2

Description

BnaC06g12210DBnaC06g12210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKB7]

Coordinates

chrLK032198:+:288717..290319

Molecular Weight (calculated)

18978.9 Da

IEP (calculated)

6.354

GRAVY (calculated)

-0.311

Length

168 amino acids

Sequence
(BLAST)

001: MENLLGLLRI HVKRGVNLAI RDISSSDPYV VVHSGKQKLK THVIKQSVNP EWNDDLTLSV TDPNQPIKLT VYDKDLFSAD DKMGEAEFSI ATYLEAVKYR
101: PKVEGGLPNG TIIMKIQPTR QNCLSEESHI VWNQGKLVQN MFLRLQHVEC GEVEIQLEWI DVPGSKGI

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.