Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003940.1-P | Field mustard | cytosol | 64.8 | 57.86 |
| CDX68329 | Canola | cytosol | 60.0 | 54.35 |
| CDY23479 | Canola | cytosol | 76.8 | 51.89 |
| CDX96278 | Canola | cytosol | 76.0 | 51.35 |
| CDY11544 | Canola | cytosol | 76.0 | 51.35 |
| AT1G70790.1 | Thale cress | cytosol | 73.6 | 49.73 |
| CDY70119 | Canola | cytosol | 76.8 | 37.94 |
| CDX96279 | Canola | cytosol | 44.8 | 33.94 |
| CDY11543 | Canola | cytosol | 44.8 | 33.94 |
| CDY04090 | Canola | cytosol | 48.0 | 33.33 |
| CDY09436 | Canola | cytosol | 48.0 | 33.33 |
| GSMUA_Achr10P... | Banana | cytosol | 43.2 | 33.33 |
| CDY17665 | Canola | cytosol | 48.0 | 33.33 |
| CDY58016 | Canola | cytosol | 48.0 | 33.33 |
| CDY48816 | Canola | cytosol | 48.0 | 33.33 |
| CDY71433 | Canola | cytosol | 42.4 | 33.12 |
| CDY04742 | Canola | cytosol | 42.4 | 33.12 |
| CDY70365 | Canola | cytosol | 47.2 | 32.78 |
| CDY47746 | Canola | mitochondrion | 44.0 | 32.74 |
| CDX82060 | Canola | mitochondrion | 44.0 | 32.74 |
| CDY71117 | Canola | cytosol | 41.6 | 32.5 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 41.6 | 30.06 |
| CDY38572 | Canola | mitochondrion | 40.0 | 29.76 |
| CDX74561 | Canola | mitochondrion | 40.0 | 29.76 |
| CDY27005 | Canola | cytosol | 40.0 | 29.76 |
| CDY51927 | Canola | cytosol | 41.6 | 29.38 |
| CDX74562 | Canola | cytosol | 39.2 | 29.34 |
| CDX96152 | Canola | cytosol | 40.8 | 29.14 |
| Os02t0327000-01 | Rice | cytosol | 38.4 | 29.09 |
| CDY01709 | Canola | mitochondrion | 38.4 | 28.57 |
| CDY07499 | Canola | cytosol | 40.0 | 28.57 |
| EES01097 | Sorghum | cytosol | 37.6 | 28.31 |
| CDX75953 | Canola | cytosol | 40.0 | 28.25 |
| CDY16452 | Canola | mitochondrion | 38.4 | 28.24 |
| CDX77307 | Canola | mitochondrion | 38.4 | 28.24 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 36.8 | 27.71 |
| CDY27654 | Canola | cytosol | 39.2 | 27.37 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 36.8 | 27.06 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 36.8 | 27.06 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 36.0 | 26.47 |
| CDX99693 | Canola | cytosol | 35.2 | 26.19 |
| Zm00001d011396_P001 | Maize | cytosol | 36.8 | 26.14 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 35.2 | 26.04 |
| CDY49631 | Canola | extracellular | 24.8 | 25.83 |
| Zm00001d044179_P001 | Maize | cytosol | 37.6 | 23.38 |
| CDY01706 | Canola | golgi, mitochondrion, plasma membrane, plastid | 39.2 | 20.76 |
| CDY40545 | Canola | endoplasmic reticulum, extracellular | 26.4 | 16.67 |
| CDX82807 | Canola | cytosol | 25.6 | 10.13 |
| CDY21329 | Canola | mitochondrion | 26.4 | 9.79 |
| CDY62002 | Canola | mitochondrion | 26.4 | 9.79 |
| CDX76421 | Canola | cytosol | 25.6 | 9.73 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 25.6 | 9.41 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 25.6 | 9.28 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 24.8 | 9.17 |
| CDY65341 | Canola | plastid | 25.6 | 8.63 |
| CDY22145 | Canola | cytosol | 26.4 | 8.62 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 23.2 | 8.58 |
| CDY28007 | Canola | cytosol | 25.6 | 7.88 |
| CDY35974 | Canola | cytosol | 25.6 | 7.88 |
| CDX74022 | Canola | cytosol | 21.6 | 7.03 |
| CDY69110 | Canola | cytosol | 4.0 | 5.32 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 26.4 | 4.68 |
| CDY23476 | Canola | cytosol | 3.2 | 3.39 |
| CDY60369 | Canola | cytosol | 3.2 | 2.15 |
Protein Annotations
| EnsemblPlants:CDY23477 | EnsemblPlantsGene:GSBRNA2T00022097001 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF296 | ProteinID:CDY23477 | ProteinID:CDY23477.1 |
| SUPFAM:SSF49562 | UniParc:UPI0004EF0D6C | UniProt:A0A078GED9 | MapMan:35.1 | : | : |
Description
BnaC06g24460DBnaC06g24460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GED9]
Coordinates
chrLK032144:-:72546..74056
Molecular Weight (calculated)
14026.9 Da
IEP (calculated)
8.233
GRAVY (calculated)
-0.513
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSNNLPGSR LVNAETVYDK DRFSGDDKMG NTEIDLRPFL EAHQMELDFQ KLPNGCAIKR IRLGRTNGLA EESTITWSNG KIIQNMILRL RNMECGEIEI
101: MLKLTAGPGF SGLGREGSKK TSWLH
101: MLKLTAGPGF SGLGREGSKK TSWLH
001: MEDKPLGILR VHVKRGINLA IRDATTSDPY VVITLANQKL KTRVINNNCN PVWNEQLTLS IKDVNDPIRL TVFDKDRFSG DDKMGDAEID FRPFLEAHQM
101: ELDFQKLPNG CAIKRIRPGR TNCLAEESSI TWSNGKIMQE MILRLKNVEC GEVELMLEWT DGPGCKGLGR EGSKKTPWMP TKRLD
101: ELDFQKLPNG CAIKRIRPGR TNCLAEESSI TWSNGKIMQE MILRLKNVEC GEVELMLEWT DGPGCKGLGR EGSKKTPWMP TKRLD
Arabidopsis Description
CAR9Protein C2-DOMAIN ABA-RELATED 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.