Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01540.1 | CDX73496 | AT3G54220.1 | 19228333 |
| AT2G01540.1 | CDX78219 | AT3G54220.1 | 19228333 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04090 | Canola | cytosol | 96.67 | 96.67 |
| AT2G01540.1 | Thale cress | cytosol | 92.78 | 92.78 |
| CDY58016 | Canola | cytosol | 91.11 | 91.11 |
| CDY09436 | Canola | cytosol | 90.56 | 90.56 |
| CDY48816 | Canola | cytosol | 90.56 | 90.56 |
| CDY17665 | Canola | cytosol | 90.56 | 90.56 |
| CDY11544 | Canola | cytosol | 63.89 | 62.16 |
| CDX96278 | Canola | cytosol | 63.33 | 61.62 |
| CDX96279 | Canola | cytosol | 54.44 | 59.39 |
| CDY11543 | Canola | cytosol | 54.44 | 59.39 |
| CDY23479 | Canola | cytosol | 60.0 | 58.38 |
| CDY27005 | Canola | cytosol | 51.67 | 55.36 |
| CDY38572 | Canola | mitochondrion | 51.67 | 55.36 |
| CDY01709 | Canola | mitochondrion | 51.67 | 55.36 |
| CDX74562 | Canola | cytosol | 51.11 | 55.09 |
| CDY71117 | Canola | cytosol | 48.89 | 55.0 |
| CDY71433 | Canola | cytosol | 48.33 | 54.38 |
| CDY04742 | Canola | cytosol | 48.33 | 54.38 |
| CDX99693 | Canola | cytosol | 49.44 | 52.98 |
| EES01097 | Sorghum | cytosol | 47.78 | 51.81 |
| CDX74561 | Canola | mitochondrion | 48.33 | 51.79 |
| CDX77307 | Canola | mitochondrion | 48.89 | 51.76 |
| CDY16452 | Canola | mitochondrion | 48.89 | 51.76 |
| CDX96152 | Canola | cytosol | 50.0 | 51.43 |
| CDY27654 | Canola | cytosol | 51.11 | 51.4 |
| GSMUA_Achr10P... | Banana | cytosol | 46.11 | 51.23 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 47.22 | 51.2 |
| CDY07499 | Canola | cytosol | 49.44 | 50.86 |
| CDX82060 | Canola | mitochondrion | 47.22 | 50.6 |
| CDY47746 | Canola | mitochondrion | 47.22 | 50.6 |
| Os02t0327000-01 | Rice | cytosol | 46.11 | 50.3 |
| CDY51927 | Canola | cytosol | 48.33 | 49.15 |
| CDX75953 | Canola | cytosol | 47.22 | 48.02 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 46.11 | 47.98 |
| Zm00001d011396_P001 | Maize | cytosol | 46.67 | 47.73 |
| CDY23477 | Canola | cytosol | 32.78 | 47.2 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 43.89 | 46.47 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 43.89 | 46.47 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 43.33 | 45.88 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 42.22 | 44.97 |
| CDY70119 | Canola | cytosol | 60.56 | 43.08 |
| Zm00001d044179_P001 | Maize | cytosol | 47.22 | 42.29 |
| CDX68329 | Canola | cytosol | 27.78 | 36.23 |
| CDY69110 | Canola | cytosol | 18.89 | 36.17 |
| CDY49631 | Canola | extracellular | 23.89 | 35.83 |
| CDY40545 | Canola | endoplasmic reticulum, extracellular | 38.33 | 34.85 |
| CDY01706 | Canola | golgi, mitochondrion, plasma membrane, plastid | 39.44 | 30.08 |
| CDX82807 | Canola | cytosol | 38.89 | 22.15 |
| CDX76421 | Canola | cytosol | 37.22 | 20.36 |
| CDY62002 | Canola | mitochondrion | 36.67 | 19.58 |
| CDY21329 | Canola | mitochondrion | 36.67 | 19.58 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 36.67 | 19.41 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 36.11 | 19.23 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 36.67 | 19.13 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 35.56 | 18.93 |
| CDY65341 | Canola | plastid | 37.78 | 18.33 |
| CDY22145 | Canola | cytosol | 37.22 | 17.49 |
| CDY28007 | Canola | cytosol | 37.22 | 16.5 |
| CDY35974 | Canola | cytosol | 36.67 | 16.26 |
| CDX74022 | Canola | cytosol | 33.33 | 15.62 |
| CDY60369 | Canola | cytosol | 11.67 | 11.29 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 38.89 | 9.93 |
| CDY23476 | Canola | cytosol | 1.67 | 2.54 |
Protein Annotations
| EnsemblPlants:CDY70365 | EnsemblPlantsGene:GSBRNA2T00098426001 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF296 | PFAM:PF00168 | PFscan:PS50004 | ProteinID:CDY70365 |
| ProteinID:CDY70365.1 | SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0004EF2D63 | UniProt:A0A078JVB2 |
| MapMan:11.1.2.1.2 | : | : | : | : | : |
Description
BnaC09g52190DBnaC09g52190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVB2]
Coordinates
chrLK041891:+:857..1717
Molecular Weight (calculated)
20029.2 Da
IEP (calculated)
5.808
GRAVY (calculated)
-0.241
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQKPLGLLT INVKRGINLA IRDHRSSDPY VVVTVADQTL KTRVIKKNCN PVWNEEMSVA IKDPNVPIRL TVFDWDKFTG DDKMGDANID IQPYLDALKM
101: GMELLRLPIG CAIKRVQPSR LNCLSDESSI VWNNGKITQD MILRLNNVEC GEIEIMLEWH EGAGCRGVTS SSQGGVSSST
101: GMELLRLPIG CAIKRVQPSR LNCLSDESSI VWNNGKITQD MILRLNNVEC GEIEIMLEWH EGAGCRGVTS SSQGGVSSST
001: MEDKPLGILR VHVKRGINLA IRDATTSDPY VVITLANQKL KTRVINNNCN PVWNEQLTLS IKDVNDPIRL TVFDKDRFSG DDKMGDAEID FRPFLEAHQM
101: ELDFQKLPNG CAIKRIRPGR TNCLAEESSI TWSNGKIMQE MILRLKNVEC GEVELMLEWT DGPGCKGLGR EGSKKTPWMP TKRLD
101: ELDFQKLPNG CAIKRIRPGR TNCLAEESSI TWSNGKIMQE MILRLKNVEC GEVELMLEWT DGPGCKGLGR EGSKKTPWMP TKRLD
Arabidopsis Description
CAR9Protein C2-DOMAIN ABA-RELATED 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.