CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96279	Canola	cytosol	100.0	100.0
Bra016185.1-P	Field mustard	cytosol	100.0	100.0
AT1G70810.1	Thale cress	cytosol	85.45	85.45
CDY71433	Canola	cytosol	69.7	71.88
CDY71117	Canola	cytosol	69.7	71.88
CDY04742	Canola	cytosol	69.7	71.88
AT1G70800.1	Thale cress	cytosol	75.15	71.26
CDY01709	Canola	mitochondrion	58.18	57.14
CDY16452	Canola	mitochondrion	58.18	56.47
CDX77307	Canola	mitochondrion	57.58	55.88
CDY58016	Canola	cytosol	60.61	55.56
CDY48816	Canola	cytosol	60.61	55.56
CDY17665	Canola	cytosol	60.61	55.56
CDY09436	Canola	cytosol	60.61	55.56
CDY04090	Canola	cytosol	60.61	55.56
CDY38572	Canola	mitochondrion	56.36	55.36
CDY27005	Canola	cytosol	56.36	55.36
CDY11544	Canola	cytosol	61.82	55.14
CDX74562	Canola	cytosol	55.76	55.09
CDX99693	Canola	cytosol	55.76	54.76
CDX96278	Canola	cytosol	61.21	54.59
CDY70365	Canola	cytosol	59.39	54.44
CDX74561	Canola	mitochondrion	55.15	54.17
GSMUA_Achr10P...	Banana	cytosol	52.73	53.7
CDX96152	Canola	cytosol	56.36	53.14
CDY47746	Canola	mitochondrion	53.94	52.98
CDX82060	Canola	mitochondrion	53.94	52.98
GSMUA_Achr2P15950_001	Banana	cytosol	55.15	52.6
CDY07499	Canola	cytosol	55.76	52.57
CDY27654	Canola	cytosol	56.97	52.51
GSMUA_Achr6P07630_001	Banana	cytosol	52.73	52.41
Os02t0327000-01	Rice	cytosol	52.12	52.12
EES01097	Sorghum	cytosol	52.12	51.81
TraesCS2A01G501300.1	Wheat	mitochondrion	53.33	51.76
CDY51927	Canola	cytosol	54.55	50.85
TraesCS2B01G529400.1	Wheat	mitochondrion	52.12	50.59
TraesCS2D01G501800.2	Wheat	mitochondrion	52.12	50.59
HORVU0Hr1G039050.2	Barley	mitochondrion	51.52	50.3
CDY23479	Canola	cytosol	56.36	50.27
CDX75953	Canola	cytosol	53.33	49.72
Zm00001d011396_P001	Maize	cytosol	50.91	47.73
CDY23477	Canola	cytosol	33.94	44.8
Zm00001d044179_P001	Maize	cytosol	51.52	42.29
CDY49631	Canola	extracellular	27.88	38.33
CDY70119	Canola	cytosol	56.36	36.76
CDY40545	Canola	endoplasmic reticulum, extracellular	40.0	33.33
CDY69110	Canola	cytosol	18.79	32.98
CDX68329	Canola	cytosol	27.27	32.61
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	46.06	32.2
CDY21329	Canola	mitochondrion	41.82	20.47
CDY62002	Canola	mitochondrion	41.82	20.47
CDX82807	Canola	cytosol	38.79	20.25
CDY39164	Canola	cytosol, mitochondrion, nucleus	41.21	20.0
CDX76421	Canola	cytosol	39.39	19.76
CDY46364	Canola	cytosol, mitochondrion, nucleus	41.21	19.71
CDX94026	Canola	cytosol, mitochondrion, nucleus	38.18	18.64
CDY58481	Canola	cytosol, mitochondrion, nucleus	37.58	18.34
CDY65341	Canola	plastid	40.0	17.79
CDY22145	Canola	cytosol	39.39	16.97
CDY28007	Canola	cytosol	40.0	16.26
CDY35974	Canola	cytosol	39.39	16.01
CDX74022	Canola	cytosol	35.76	15.36
CDY60369	Canola	cytosol	12.73	11.29
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	39.39	9.22
CDY23476	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY11543	EnsemblPlantsGene:GSBRNA2T00049633001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF296	PFAM:PF00168	PFscan:PS50004	ProteinID:CDY11543
ProteinID:CDY11543.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00018C679C	UniProt:A0A078FHL1	MapMan:11.1.2.1.2

Description

BnaC06g31960DBnaA07g28900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHL1]

Coordinates

chrLK032012:-:15087..16367

Molecular Weight (calculated)

18684.8 Da

IEP (calculated)

5.705

GRAVY (calculated)

-0.301

Length

165 amino acids

Sequence
(BLAST)

001: MEELAGLLRI RVKKGINLAR RDSLSSDPFV VITMGTQKLK GRTVENNCNP EWNEELTLAL KHPNEPVTLI VYDKDTFTSH DKMGDAKIDI KPFLEVHKLG
101: LQELPDGTVI KRVLPTKENC LSEESRIVYH NGKIVQDMIL VLRNVECGEV EIQLEWIEIP GGRGL

Best Arabidopsis Sequence Match ( AT1G70810.1 )
(BLAST)

001: MEELVGLLRI RVKRGINLAQ RDTLSSDPFV VITMGSQKLK TRVVENNCNP EWNEELTLAL RHPDEPVNLI VYDKDTFTSH DKMGDAKIDI KPFLEVHKMG
101: LQELPDGTEI KRVVPNRENC LAEASSIVSN NGKIVQNMIL LLRNVECGEV EIQLEWIDIP GSRGL

Arabidopsis Description

CAR7Protein C2-DOMAIN ABA-RELATED 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSL1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.