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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004161.1-P Field mustard cytosol 99.43 99.43
CDX96152 Canola cytosol 97.71 97.71
AT1G66360.1 Thale cress cytosol 86.29 86.78
CDY01709 Canola mitochondrion 66.29 69.05
CDY38572 Canola mitochondrion 65.14 67.86
CDY27005 Canola cytosol 64.57 67.26
CDX74561 Canola mitochondrion 64.0 66.67
VIT_14s0006g01250.t01 Wine grape cytosol 62.29 66.06
CDX74562 Canola cytosol 62.86 65.87
KRG97928 Soybean cytosol 61.71 65.45
KRH30951 Soybean cytosol 61.14 64.85
CDX99693 Canola cytosol 61.14 63.69
Solyc02g091520.2.1 Tomato cytosol, mitochondrion 60.0 63.64
PGSC0003DMT400078786 Potato cytosol 60.0 63.64
Solyc02g063360.2.1 Tomato cytosol 60.0 63.25
Solyc02g063370.2.1 Tomato cytosol 60.0 63.25
CDY27654 Canola cytosol 61.71 60.34
GSMUA_Achr10P... Banana cytosol 53.14 57.41
GSMUA_Achr6P07630_001 Banana cytosol 53.14 56.02
CDX96279 Canola cytosol 52.57 55.76
CDY11543 Canola cytosol 52.57 55.76
CDY47746 Canola mitochondrion 53.14 55.36
CDX82060 Canola mitochondrion 53.14 55.36
CDY16452 Canola mitochondrion 53.71 55.29
CDY51927 Canola cytosol 55.43 54.8
CDX77307 Canola mitochondrion 53.14 54.71
CDX75953 Canola cytosol 54.86 54.24
CDY71117 Canola cytosol 49.14 53.75
GSMUA_Achr2P15950_001 Banana cytosol 52.57 53.18
CDY71433 Canola cytosol 48.0 52.5
CDY04742 Canola cytosol 48.0 52.5
CDY11544 Canola cytosol 55.43 52.43
TraesCS2B01G529400.1 Wheat mitochondrion 50.86 52.35
HORVU0Hr1G039050.2 Barley mitochondrion 50.29 52.07
CDX96278 Canola cytosol 54.86 51.89
EES01097 Sorghum cytosol 49.14 51.81
TraesCS2A01G501300.1 Wheat mitochondrion 50.29 51.76
TraesCS2D01G501800.2 Wheat mitochondrion 50.29 51.76
CDY49631 Canola extracellular 35.43 51.67
Os02t0327000-01 Rice cytosol 48.57 51.52
CDY17665 Canola cytosol 52.57 51.11
CDY58016 Canola cytosol 52.57 51.11
CDY48816 Canola cytosol 51.43 50.0
CDY09436 Canola cytosol 51.43 50.0
CDY04090 Canola cytosol 51.43 50.0
CDY70365 Canola cytosol 50.86 49.44
CDY23479 Canola cytosol 50.86 48.11
Zm00001d011396_P001 Maize cytosol 48.0 47.73
Zm00001d044179_P001 Maize cytosol 49.14 42.79
CDY23477 Canola cytosol 28.57 40.0
CDY69110 Canola cytosol 21.14 39.36
CDY01706 Canola golgi, mitochondrion, plasma membrane, plastid 52.57 38.98
CDY70119 Canola cytosol 50.29 34.78
CDY40545 Canola endoplasmic reticulum, extracellular 38.86 34.34
CDX68329 Canola cytosol 21.14 26.81
CDX82807 Canola cytosol 38.29 21.2
CDY62002 Canola mitochondrion 40.57 21.07
CDY21329 Canola mitochondrion 40.57 21.07
CDY39164 Canola cytosol, mitochondrion, nucleus 40.0 20.59
CDX76421 Canola cytosol 38.29 20.36
CDY46364 Canola cytosol, mitochondrion, nucleus 40.0 20.29
CDX94026 Canola cytosol, mitochondrion, nucleus 38.29 19.82
CDY58481 Canola cytosol, mitochondrion, nucleus 37.71 19.53
CDY65341 Canola plastid 38.86 18.33
CDY22145 Canola cytosol 39.43 18.02
CDY28007 Canola cytosol 38.86 16.75
CDY35974 Canola cytosol 38.86 16.75
CDX74022 Canola cytosol 34.86 15.89
CDX79040 Canola cytosol, mitochondrion, nucleus, plastid 38.29 9.5
CDY60369 Canola cytosol 9.71 9.14
CDY23476 Canola cytosol 2.29 3.39
Protein Annotations
EnsemblPlants:CDY07499EnsemblPlantsGene:GSBRNA2T00124505001Gene3D:2.60.40.150InterPro:C2_domInterPro:C2_domain_sfInterPro:IPR000008
InterPro:IPR035892PANTHER:PTHR23180PANTHER:PTHR23180:SF375PFAM:PF00168PFscan:PS50004PRINTS:PR00360
ProteinID:CDY07499ProteinID:CDY07499.1SMART:SM00239SUPFAM:SSF49562UniParc:UPI0004EF0A1BUniProt:A0A078F3E8
MapMan:11.1.2.1.2:::::
Description
BnaA07g25780DBnaA07g25780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3E8]
Coordinates
chrLK031978:+:992899..994032
Molecular Weight (calculated)
20287.6 Da
IEP (calculated)
5.316
GRAVY (calculated)
-0.251
Length
175 amino acids
Sequence
(BLAST)
001: MENMLGLLRL HVIRGVNLAI RDSKSSDPYV IVRMGQQKLR TRVVKKNLNP EWNEDLTLSI SDPVLPIKIM VYDRDWFSRD DKMGDAFFHI DPFLEAIRIQ
101: NQFRGLPEGT VIMKIQASRQ NCLSEESKIV WNNGKIVQNM FLKLQNVECG EVDLQLEWID VSGLLSINEH EDVAY
Best Arabidopsis Sequence Match ( AT1G66360.1 )
(BLAST)
001: MENMLGLLRL HVIRGVNLAI RDSQSSDPYV IVRMGKQKLR TRVMKKNLNT EWNEDLTLSV TDPTLPVKIM VYDRDRFSRD DKMGDAIFHI DPFLEAIRIQ
101: NQLGGLPEGT VIMKIQASRQ NCLSEESKIV WHKGKIVQNM FLKLQNVERG EIELQLEWID VSGALTDDAE DVAF
Arabidopsis Description
CAR2Protein C2-DOMAIN ABA-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.