CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51927	Canola	cytosol	98.31	98.31
Bra001693.1-P	Field mustard	cytosol	93.79	93.79
AT3G17980.1	Thale cress	cytosol	93.22	93.22
CDY16452	Canola	mitochondrion	77.97	81.18
CDX77307	Canola	mitochondrion	76.84	80.0
KRH41845	Soybean	cytosol	71.75	76.97
KRH60540	Soybean	cytosol	74.58	76.3
PGSC0003DMT400074100	Potato	cytosol	70.06	75.15
Solyc12g040800.1.1	Tomato	cytosol	70.06	74.7
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	68.36	73.33
Solyc03g118710.2.1	Tomato	cytosol	68.36	73.33
Solyc06g068940.2.1	Tomato	cytosol	67.8	72.73
PGSC0003DMT400037472	Potato	cytosol	73.45	71.82
KRH48640	Soybean	cytosol	68.93	69.32
CDX82060	Canola	mitochondrion	64.41	67.86
CDY47746	Canola	mitochondrion	63.84	67.26
KRH39062	Soybean	cytosol	41.24	66.97
CDY38572	Canola	mitochondrion	62.15	65.48
CDY27005	Canola	cytosol	61.58	64.88
CDX99693	Canola	cytosol	61.02	64.29
GSMUA_Achr10P...	Banana	cytosol	58.76	64.2
CDY01709	Canola	mitochondrion	60.45	63.69
GSMUA_Achr6P07630_001	Banana	cytosol	58.19	62.05
CDX74561	Canola	mitochondrion	58.76	61.9
GSMUA_Achr2P15950_001	Banana	cytosol	60.45	61.85
CDX74562	Canola	cytosol	58.19	61.68
KRH39078	Soybean	endoplasmic reticulum, extracellular	69.49	60.29
CDY27654	Canola	cytosol	60.45	59.78
Os02t0327000-01	Rice	cytosol	54.8	58.79
TraesCS2A01G501300.1	Wheat	mitochondrion	55.93	58.24
HORVU0Hr1G039050.2	Barley	mitochondrion	55.37	57.99
EES01097	Sorghum	cytosol	53.67	57.23
TraesCS2B01G529400.1	Wheat	mitochondrion	54.24	56.47
CDX96152	Canola	cytosol	55.37	56.0
TraesCS2D01G501800.2	Wheat	mitochondrion	53.67	55.88
CDY07499	Canola	cytosol	54.24	54.86
CDY71433	Canola	cytosol	49.15	54.38
CDY71117	Canola	cytosol	49.15	54.38
CDY04742	Canola	cytosol	49.15	54.38
Zm00001d011396_P001	Maize	cytosol	53.11	53.41
CDY11543	Canola	cytosol	49.72	53.33
CDX96279	Canola	cytosol	49.72	53.33
CDY11544	Canola	cytosol	54.24	51.89
CDX96278	Canola	cytosol	53.67	51.35
Zm00001d044179_P001	Maize	cytosol	54.8	48.26
CDY04090	Canola	cytosol	48.02	47.22
CDY70365	Canola	cytosol	48.02	47.22
CDY09436	Canola	cytosol	48.02	47.22
CDY48816	Canola	cytosol	48.02	47.22
CDY23479	Canola	cytosol	49.15	47.03
CDY58016	Canola	cytosol	47.46	46.67
CDY17665	Canola	cytosol	47.46	46.67
CDY23477	Canola	cytosol	28.25	40.0
CDY49631	Canola	extracellular	24.29	35.83
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	47.46	35.59
CDY40545	Canola	endoplasmic reticulum, extracellular	38.98	34.85
CDY69110	Canola	cytosol	18.08	34.04
CDY70119	Canola	cytosol	48.59	33.99
CDX68329	Canola	cytosol	22.03	28.26
CDX82807	Canola	cytosol	37.85	21.2
CDY21329	Canola	mitochondrion	39.55	20.77
CDY62002	Canola	mitochondrion	39.55	20.77
CDY39164	Canola	cytosol, mitochondrion, nucleus	38.98	20.29
CDX76421	Canola	cytosol	37.29	20.06
CDY46364	Canola	cytosol, mitochondrion, nucleus	38.98	20.0
CDX94026	Canola	cytosol, mitochondrion, nucleus	36.16	18.93
CDY58481	Canola	cytosol, mitochondrion, nucleus	35.59	18.64
CDY65341	Canola	plastid	37.85	18.06
CDY22145	Canola	cytosol	36.16	16.71
CDY28007	Canola	cytosol	36.72	16.01
CDY35974	Canola	cytosol	36.72	16.01
CDX74022	Canola	cytosol	33.9	15.62
CDY60369	Canola	cytosol	10.73	10.22
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	38.42	9.65
CDY23476	Canola	cytosol	1.13	1.69

Protein Annotations

EnsemblPlants:CDX75953	EnsemblPlantsGene:GSBRNA2T00123983001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004	ProteinID:CDX75953
ProteinID:CDX75953.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0001B642B7	MapMan:11.1.2.1.2

Description

BnaC03g40360D

Coordinates

chrLK031805:+:2117145..2117995

Molecular Weight (calculated)

19912.2 Da

IEP (calculated)

5.337

GRAVY (calculated)

-0.212

Length

177 amino acids

Sequence
(BLAST)

001: MTTTGPARTS SLMDDLLGLL RIRIRRGVNL AVRDINSSDP YIVVKMGKQK LKTRVISKDV NPEWNEDLTL SVTDPSLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLLSGT IVTTVQPSRR NCLAEESKVT WIDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.