Factsheet for Bra001693.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51927	Canola	cytosol	95.48	95.48
CDX75953	Canola	cytosol	93.79	93.79
AT3G17980.1	Thale cress	cytosol	92.09	92.09
Bra014145.1-P	Field mustard	mitochondrion	77.4	80.59
KRH60540	Soybean	cytosol	72.88	74.57
KRH41845	Soybean	cytosol	69.49	74.55
Solyc12g040800.1.1	Tomato	cytosol	69.49	74.1
PGSC0003DMT400074100	Potato	cytosol	68.93	73.94
Solyc03g118710.2.1	Tomato	cytosol	66.67	71.52
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	66.67	71.52
PGSC0003DMT400037472	Potato	cytosol	72.88	71.27
Solyc06g068940.2.1	Tomato	cytosol	65.54	70.3
Bra008104.1-P	Field mustard	cytosol, mitochondrion	63.84	67.26
KRH48640	Soybean	cytosol	66.67	67.05
Bra018410.1-P	Field mustard	mitochondrion	62.15	65.48
Bra025441.1-P	Field mustard	cytosol	60.45	63.69
Bra028147.1-P	Field mustard	cytosol	59.89	63.1
KRH39062	Soybean	cytosol	38.42	62.39
Bra028148.1-P	Field mustard	mitochondrion	58.76	61.9
GSMUA_Achr10P...	Banana	cytosol	56.5	61.73
GSMUA_Achr2P15950_001	Banana	cytosol	59.32	60.69
GSMUA_Achr6P07630_001	Banana	cytosol	56.5	60.24
KRH39078	Soybean	endoplasmic reticulum, extracellular	67.8	58.82
Os02t0327000-01	Rice	cytosol	53.11	56.97
TraesCS2A01G501300.1	Wheat	mitochondrion	54.24	56.47
HORVU0Hr1G039050.2	Barley	mitochondrion	53.67	56.21
EES01097	Sorghum	cytosol	52.54	56.02
TraesCS2B01G529400.1	Wheat	mitochondrion	52.54	54.71
Bra024565.1-P	Field mustard	cytosol	49.15	54.38
Bra004161.1-P	Field mustard	cytosol	53.67	54.29
TraesCS2D01G501800.2	Wheat	mitochondrion	51.98	54.12
Bra016185.1-P	Field mustard	cytosol	50.28	53.94
Bra016186.1-P	Field mustard	cytosol	54.24	51.89
Zm00001d011396_P001	Maize	cytosol	50.85	51.14
Zm00001d044179_P001	Maize	cytosol	53.11	46.77
Bra026650.1-P	Field mustard	cytosol	47.46	46.67
Bra017445.1-P	Field mustard	cytosol	47.46	46.67
Bra024877.1-P	Field mustard	cytosol	46.89	46.11
Bra003941.1-P	Field mustard	cytosol	49.15	34.39
Bra003940.1-P	Field mustard	cytosol	23.16	29.29
Bra029572.1-P	Field mustard	cytosol	40.11	25.72
Bra038783.1-P	Field mustard	cytosol	36.16	18.93
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	34.46	18.21
Bra024773.1-P	Field mustard	cytosol	27.68	16.9
Bra013508.1-P	Field mustard	cytosol	36.72	16.54
Bra029688.1-P	Field mustard	cytosol	35.59	15.52
Bra001277.1-P	Field mustard	cytosol	32.77	15.1

Protein Annotations

MapMan:11.1.2.1.2	Gene3D:2.60.40.150	EnsemblPlantsGene:Bra001693	EnsemblPlants:Bra001693.1	EnsemblPlants:Bra001693.1-P	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005543	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008289	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009789	GO:GO:0009987	GO:GO:0016020	GO:GO:1901002	InterPro:IPR000008
InterPro:IPR035892	UniProt:M4CBW3	PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000254046A	SEG:seg	:	:

Description

AT3G17980 (E=5e-081) | C2 domain-containing protein

Coordinates

chrA03:+:17884530..17885240

Molecular Weight (calculated)

19855.0 Da

IEP (calculated)

6.123

GRAVY (calculated)

-0.265

Length

177 amino acids

Sequence
(BLAST)

001: MTTTGPARTS SLMDDLLGLL RIRIKRGVNL AVRDINSSDP YIVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDPSLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVATVHPSRA NCLAEESRVT WIDGKLVQER VLRLRHAECG EVEAQLHWID LPGSKGL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.