Factsheet for Bra025441.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27654	Canola	cytosol	97.02	91.06
Bra018410.1-P	Field mustard	mitochondrion	86.9	86.9
Bra028148.1-P	Field mustard	mitochondrion	82.74	82.74
Bra028147.1-P	Field mustard	cytosol	82.74	82.74
AT5G37740.2	Thale cress	cytosol	79.76	75.28
KRG97928	Soybean	cytosol	65.48	66.67
KRH30951	Soybean	cytosol	64.29	65.45
Bra014145.1-P	Field mustard	mitochondrion	64.29	63.53
VIT_14s0006g01250.t01	Wine grape	cytosol	61.9	63.03
PGSC0003DMT400078786	Potato	cytosol	61.31	62.42
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	61.31	62.42
Solyc02g063360.2.1	Tomato	cytosol	61.31	62.05
Bra004161.1-P	Field mustard	cytosol	64.29	61.71
Solyc02g063370.2.1	Tomato	cytosol	60.12	60.84
Bra001693.1-P	Field mustard	cytosol	63.69	60.45
GSMUA_Achr10P...	Banana	cytosol	57.14	59.26
GSMUA_Achr2P15950_001	Banana	cytosol	59.52	57.8
Bra008104.1-P	Field mustard	cytosol, mitochondrion	57.74	57.74
TraesCS2A01G501300.1	Wheat	mitochondrion	58.33	57.65
GSMUA_Achr6P07630_001	Banana	cytosol	56.55	57.23
TraesCS2B01G529400.1	Wheat	mitochondrion	57.14	56.47
TraesCS2D01G501800.2	Wheat	mitochondrion	57.14	56.47
Bra016185.1-P	Field mustard	cytosol	55.36	56.36
HORVU0Hr1G039050.2	Barley	mitochondrion	56.55	56.21
Os02t0327000-01	Rice	cytosol	54.76	55.76
EES01097	Sorghum	cytosol	53.57	54.22
Bra024565.1-P	Field mustard	cytosol	49.4	51.88
Bra017445.1-P	Field mustard	cytosol	55.36	51.67
Bra016186.1-P	Field mustard	cytosol	56.55	51.35
Bra024877.1-P	Field mustard	cytosol	54.76	51.11
Bra026650.1-P	Field mustard	cytosol	54.17	50.56
Zm00001d011396_P001	Maize	cytosol	51.79	49.43
Zm00001d044179_P001	Maize	cytosol	53.57	44.78
Bra003941.1-P	Field mustard	cytosol	50.6	33.6
Bra029572.1-P	Field mustard	cytosol	43.45	26.45
Bra003940.1-P	Field mustard	cytosol	22.02	26.43
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	39.29	19.7
Bra038783.1-P	Field mustard	cytosol	38.69	19.23
Bra013508.1-P	Field mustard	cytosol	39.88	17.05
Bra024773.1-P	Field mustard	cytosol	29.17	16.9
Bra029688.1-P	Field mustard	cytosol	38.1	15.76
Bra001277.1-P	Field mustard	cytosol	35.12	15.36

Protein Annotations

EnsemblPlants:Bra025441.1	EnsemblPlants:Bra025441.1-P	EnsemblPlantsGene:Bra025441	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000254387D	UniProt:M4E9I5	MapMan:11.1.2.1.2	:

Description

AT5G37740 (E=1e-076) | C2 domain-containing protein

Coordinates

chrA04:+:8719368..8720876

Molecular Weight (calculated)

19176.2 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.303

Length

168 amino acids

Sequence
(BLAST)

001: MENILGLLRI HVKRGVNLAI RDTSSSDPYI VFYSGKQKLK TRVIKHSINP EWNDELTLSV TDPNLSVKLT VYDKDLFSAD DKMGEAEFSI APYLEAIKLR
101: HKLEGQLPNG TIIMKVQPTR QNCLSEESHI LLNQDKLVQN MFLRLQHVEC GEVELQLEWI DVPGSKGF

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.