Factsheet for Bra018410.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38572	Canola	mitochondrion	100.0	100.0
CDY27005	Canola	cytosol	98.81	98.81
Bra028147.1-P	Field mustard	cytosol	88.1	88.1
Bra025441.1-P	Field mustard	cytosol	86.9	86.9
Bra028148.1-P	Field mustard	mitochondrion	86.31	86.31
AT5G37740.2	Thale cress	cytosol	82.74	78.09
KRH30951	Soybean	cytosol	67.26	68.48
KRG97928	Soybean	cytosol	67.26	68.48
Solyc02g063360.2.1	Tomato	cytosol	65.48	66.27
Bra004161.1-P	Field mustard	cytosol	68.45	65.71
VIT_14s0006g01250.t01	Wine grape	cytosol	64.29	65.45
Bra014145.1-P	Field mustard	mitochondrion	66.07	65.29
Solyc02g063370.2.1	Tomato	cytosol	64.29	65.06
PGSC0003DMT400078786	Potato	cytosol	63.69	64.85
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	63.1	64.24
Bra001693.1-P	Field mustard	cytosol	65.48	62.15
GSMUA_Achr6P07630_001	Banana	cytosol	58.93	59.64
Bra008104.1-P	Field mustard	cytosol, mitochondrion	59.52	59.52
GSMUA_Achr10P...	Banana	cytosol	57.14	59.26
GSMUA_Achr2P15950_001	Banana	cytosol	59.52	57.8
TraesCS2A01G501300.1	Wheat	mitochondrion	57.14	56.47
Os02t0327000-01	Rice	cytosol	55.36	56.36
Bra016185.1-P	Field mustard	cytosol	55.36	56.36
HORVU0Hr1G039050.2	Barley	mitochondrion	56.55	56.21
TraesCS2B01G529400.1	Wheat	mitochondrion	55.95	55.29
TraesCS2D01G501800.2	Wheat	mitochondrion	55.95	55.29
EES01097	Sorghum	cytosol	54.17	54.82
Bra016186.1-P	Field mustard	cytosol	60.12	54.59
Bra024565.1-P	Field mustard	cytosol	51.19	53.75
Bra017445.1-P	Field mustard	cytosol	56.55	52.78
Bra024877.1-P	Field mustard	cytosol	55.95	52.22
Bra026650.1-P	Field mustard	cytosol	55.36	51.67
Zm00001d011396_P001	Maize	cytosol	53.57	51.14
Zm00001d044179_P001	Maize	cytosol	55.95	46.77
Bra003941.1-P	Field mustard	cytosol	54.17	35.97
Bra003940.1-P	Field mustard	cytosol	23.21	27.86
Bra029572.1-P	Field mustard	cytosol	42.86	26.09
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	41.07	20.6
Bra038783.1-P	Field mustard	cytosol	36.9	18.34
Bra024773.1-P	Field mustard	cytosol	30.95	17.93
Bra013508.1-P	Field mustard	cytosol	38.69	16.54
Bra029688.1-P	Field mustard	cytosol	39.88	16.5
Bra001277.1-P	Field mustard	cytosol	36.31	15.89

Protein Annotations

EnsemblPlants:Bra018410.1	EnsemblPlants:Bra018410.1-P	EnsemblPlantsGene:Bra018410	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0001B642BA	UniProt:M4DPG9	MapMan:11.1.2.1.2	:

Description

AT5G37740 (E=3e-079) | C2 domain-containing protein

Coordinates

chrA05:-:8069307..8070704

Molecular Weight (calculated)

18973.0 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.265

Length

168 amino acids

Sequence
(BLAST)

001: MENLLGLLRI HVKRGVNLAI RDISSSDPYV VVHSGKQKLK THVIKHSVNP EWNDDLTLSV TDPNLPIKLT VYDKDLFSAD DKMGEAEFSI ATYLEAVKYR
101: PKVEGGLPNG TIIMKIQPTR QNCLSEESHI VWNQGKLVQN MFLRLQHVEC GEVEIQLEWI DVPGSKGI

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.