Factsheet for Bra016186.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96278	Canola	cytosol	100.0	100.0
AT1G70790.1	Thale cress	cytosol	92.97	92.97
Bra003941.1-P	Field mustard	cytosol	89.19	65.22
Bra017445.1-P	Field mustard	cytosol	62.7	64.44
VIT_01s0011g05230.t01	Wine grape	cytosol	56.76	63.25
Bra026650.1-P	Field mustard	cytosol	61.08	62.78
Bra024877.1-P	Field mustard	cytosol	61.08	62.78
Bra016185.1-P	Field mustard	cytosol	54.59	61.21
KRG94240	Soybean	cytosol	55.14	60.35
Bra018410.1-P	Field mustard	mitochondrion	54.59	60.12
Bra024565.1-P	Field mustard	cytosol	51.89	60.0
KRH38191	Soybean	cytosol	58.38	60.0
Bra008104.1-P	Field mustard	cytosol, mitochondrion	54.05	59.52
GSMUA_Achr10P...	Banana	cytosol	51.35	58.64
GSMUA_Achr6P07630_001	Banana	cytosol	51.35	57.23
Bra028147.1-P	Field mustard	cytosol	51.89	57.14
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	51.35	56.89
Bra028148.1-P	Field mustard	mitochondrion	51.35	56.55
Bra025441.1-P	Field mustard	cytosol	51.35	56.55
Bra014145.1-P	Field mustard	mitochondrion	51.35	55.88
Bra004161.1-P	Field mustard	cytosol	52.43	55.43
EES01097	Sorghum	cytosol	49.73	55.42
KRG94243	Soybean	cytosol, mitochondrion	51.89	55.17
Bra003940.1-P	Field mustard	cytosol	41.62	55.0
GSMUA_Achr2P15950_001	Banana	cytosol	50.81	54.34
Bra001693.1-P	Field mustard	cytosol	51.89	54.24
PGSC0003DMT400042134	Potato	cytosol	39.46	54.07
Os02t0327000-01	Rice	cytosol	48.11	53.94
KRH50393	Soybean	cytosol	49.19	53.53
TraesCS2D01G501800.2	Wheat	mitochondrion	47.57	51.76
TraesCS2A01G501300.1	Wheat	mitochondrion	47.03	51.18
TraesCS2B01G529400.1	Wheat	mitochondrion	47.03	51.18
Zm00001d011396_P001	Maize	cytosol	48.65	51.14
HORVU0Hr1G039050.2	Barley	mitochondrion	45.95	50.3
PGSC0003DMT400020051	Potato	cytosol	43.78	49.39
PGSC0003DMT400059720	Potato	cytosol	43.24	47.9
KRG89347	Soybean	cytosol	17.3	47.76
Solyc04g007800.2.1	Tomato	cytosol	42.7	47.31
Zm00001d044179_P001	Maize	cytosol	48.65	44.78
Bra029572.1-P	Field mustard	cytosol	39.46	26.45
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	38.92	21.49
Bra038783.1-P	Field mustard	cytosol	35.14	19.23
Bra024773.1-P	Field mustard	cytosol	29.19	18.62
Bra029688.1-P	Field mustard	cytosol	38.38	17.49
Bra013508.1-P	Field mustard	cytosol	36.76	17.3
Bra001277.1-P	Field mustard	cytosol	35.68	17.19

Protein Annotations

EnsemblPlants:Bra016186.1	EnsemblPlants:Bra016186.1-P	EnsemblPlantsGene:Bra016186	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF296	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0001DE411F	UniProt:M4DI59	MapMan:11.1.2.1.2	:

Description

AT1G70790 (E=5e-102) | C2 domain-containing protein

Coordinates

chrA07:+:18997703..18999298

Molecular Weight (calculated)

21013.4 Da

IEP (calculated)

8.207

GRAVY (calculated)

-0.602

Length

185 amino acids

Sequence
(BLAST)

001: MEDKPLGILR VHVKRGINLA IRDSTSSDPY VVVTLGNQKL KTRVINSNCN PVWNEQLTLS IKDVNDPIRL TVYDKDRFSG DDKMGDGEID MRPFLEAHQM
101: ELDFQKLPNG CAIKRIRPGR TNCLAEESSI TWSNGKIKQD MILRLRNVEC GELEIMLEWT DGPGCKGLGR EGSKKTPWMP TKRLD

Best Arabidopsis Sequence Match ( AT1G70790.1 )
(BLAST)

001: MEDKPLGILR VHVKRGINLA IRDATTSDPY VVITLANQKL KTRVINNNCN PVWNEQLTLS IKDVNDPIRL TVFDKDRFSG DDKMGDAEID FRPFLEAHQM
101: ELDFQKLPNG CAIKRIRPGR TNCLAEESSI TWSNGKIMQE MILRLKNVEC GEVELMLEWT DGPGCKGLGR EGSKKTPWMP TKRLD

Arabidopsis Description

CAR9Protein C2-DOMAIN ABA-RELATED 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.