Factsheet for Bra029688.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35974	Canola	cytosol	99.26	99.26
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	73.4	88.96
AT3G07940.1	Thale cress	cytosol	83.99	88.57
Bra001277.1-P	Field mustard	cytosol	79.8	84.38
KRH30029	Soybean	cytosol	63.79	66.24
KRH20756	Soybean	cytosol	58.87	64.95
KRH13401	Soybean	cytosol	58.62	64.67
VIT_13s0019g00350.t01	Wine grape	cytosol	60.84	62.37
Solyc08g043140.2.1	Tomato	cytosol	60.34	62.03
PGSC0003DMT400068533	Potato	cytosol	60.1	61.77
GSMUA_Achr5P16180_001	Banana	cytosol	54.43	60.22
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	50.99	59.65
KRH62915	Soybean	cytosol	49.01	56.7
TraesCS1B01G251400.1	Wheat	cytosol	33.25	54.66
Os01t0951100-01	Rice	cytosol	50.99	54.33
Bra029572.1-P	Field mustard	cytosol	36.21	53.26
TraesCS1A01G239200.1	Wheat	cytosol	48.03	52.0
TraesCS1D01G239400.3	Wheat	cytosol	48.03	51.59
EES18146	Sorghum	cytosol	48.52	51.17
Zm00001d038063_P001	Maize	nucleus	47.54	50.13
Os05t0382000-01	Rice	cytosol	48.28	49.62
Bra038783.1-P	Field mustard	cytosol	39.66	47.63
HORVU1Hr1G057260.3	Barley	cytosol	46.55	46.21
TraesCS3B01G548000.1	Wheat	cytosol	49.75	42.44
HORVU3Hr1G108480.1	Barley	cytosol	50.0	42.29
TraesCS3D01G494100.1	Wheat	cytosol	49.01	40.7
Bra014145.1-P	Field mustard	mitochondrion	17.0	40.59
Bra018410.1-P	Field mustard	mitochondrion	16.5	39.88
Bra008104.1-P	Field mustard	cytosol, mitochondrion	16.5	39.88
Bra004161.1-P	Field mustard	cytosol	17.0	39.43
Bra016185.1-P	Field mustard	cytosol	16.01	39.39
Bra028147.1-P	Field mustard	cytosol	16.01	38.69
Bra016186.1-P	Field mustard	cytosol	17.49	38.38
Bra025441.1-P	Field mustard	cytosol	15.76	38.1
Bra024565.1-P	Field mustard	cytosol	14.78	37.5
Bra028148.1-P	Field mustard	mitochondrion	15.02	36.31
Bra017445.1-P	Field mustard	cytosol	16.01	36.11
Bra013508.1-P	Field mustard	cytosol	34.73	35.88
Bra001693.1-P	Field mustard	cytosol	15.52	35.59
Bra026650.1-P	Field mustard	cytosol	15.27	34.44
Bra024877.1-P	Field mustard	cytosol	15.02	33.89
Bra024773.1-P	Field mustard	cytosol	23.15	32.41
Bra003941.1-P	Field mustard	cytosol	19.46	31.23
Zm00001d011855_P002	Maize	cytosol	48.77	18.84
Bra003940.1-P	Field mustard	cytosol	6.4	18.57

Protein Annotations

Gene3D:2.60.40.150	Gene3D:3.30.40.160	MapMan:35.1	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
EnsemblPlantsGene:Bra029688	EnsemblPlants:Bra029688.1	EnsemblPlants:Bra029688.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	UniProt:M4ELM0	PFAM:PF00168
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF390
SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI0002547DF0	:

Description

AT3G07940 (E=1e-195) | zinc finger and C2 domain protein, putative

Coordinates

chrA05:-:22648442..22650422

Molecular Weight (calculated)

45284.1 Da

IEP (calculated)

6.399

GRAVY (calculated)

-0.365

Length

406 amino acids

Sequence
(BLAST)

001: MSQFFSEHLS CSRCLGSSLE MSLGQANVNP IEVSSGSHAC LYDLLCSETP RGILQKDFQT STSDPRDRLE KLLKQSGNKY CADCGSPEPK WVSLSLGVFI
101: CIKCSGVHRS LGVHISKVFS IKLDEWTDEQ VDMLVGYGGN TAVNQRFEAC NMDQLKKPKP NSNNEERNDF IRKKYELHQF MDPQDSALCT YEQPTIINNS
201: LPSLCSASAS HRSAKNRIGQ AFRNSWGRRE SDHKCPKKSN SMAGMVEFVG LIRVNVVKGT NLAVRDVMTS DPYVILSLGQ QSVKTRVIKN NLNPVWNETL
301: MLSIPEQMPP LKVLVYDKDT FTTDDFMGEA EIDIQPLVSA AIAYETSSIK EPMQLGSWVA SKENTLVSDG IISQDEGKVK QDISLRLQKV ERGVLEIQLE
401: CLPLTQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.