Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068533 | Potato | cytosol | 70.71 | 70.89 |
| Solyc08g043140.2.1 | Tomato | cytosol | 70.2 | 70.38 |
| GSMUA_Achr5P16180_001 | Banana | cytosol | 62.63 | 67.57 |
| KRH30029 | Soybean | cytosol | 65.91 | 66.75 |
| GSMUA_Achr8P09660_001 | Banana | cytosol, plastid | 58.33 | 66.57 |
| Bra040041.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 55.3 | 65.37 |
| AT3G07940.1 | Thale cress | cytosol | 63.13 | 64.94 |
| KRH13401 | Soybean | cytosol | 60.1 | 64.67 |
| KRH20756 | Soybean | cytosol | 60.1 | 64.67 |
| CDY22145 | Canola | cytosol | 61.62 | 63.71 |
| Bra001277.1-P | Field mustard | cytosol | 59.6 | 61.46 |
| CDX74022 | Canola | cytosol | 59.34 | 61.2 |
| CDY35974 | Canola | cytosol | 62.63 | 61.08 |
| Bra029688.1-P | Field mustard | cytosol | 62.37 | 60.84 |
| KRH62915 | Soybean | cytosol | 53.54 | 60.4 |
| CDY28007 | Canola | cytosol | 61.87 | 60.34 |
| TraesCS1B01G251400.1 | Wheat | cytosol | 36.11 | 57.89 |
| Os01t0951100-01 | Rice | cytosol | 53.28 | 55.38 |
| Zm00001d038063_P001 | Maize | nucleus | 52.53 | 54.03 |
| TraesCS1A01G239200.1 | Wheat | cytosol | 50.76 | 53.6 |
| EES18146 | Sorghum | cytosol | 51.77 | 53.25 |
| TraesCS1D01G239400.3 | Wheat | cytosol | 50.51 | 52.91 |
| VIT_10s0003g04900.t01 | Wine grape | cytosol | 43.18 | 51.82 |
| Os05t0382000-01 | Rice | cytosol | 51.52 | 51.65 |
| HORVU1Hr1G057260.3 | Barley | cytosol | 51.26 | 49.63 |
| TraesCS3B01G548000.1 | Wheat | cytosol | 52.27 | 43.49 |
| VIT_14s0006g01250.t01 | Wine grape | cytosol | 17.93 | 43.03 |
| HORVU3Hr1G108480.1 | Barley | cytosol | 51.52 | 42.5 |
| VIT_17s0000g02290.t01 | Wine grape | cytosol, plastid | 19.19 | 41.99 |
| VIT_01s0011g05230.t01 | Wine grape | cytosol | 17.42 | 41.57 |
| TraesCS3D01G494100.1 | Wheat | cytosol | 51.01 | 41.31 |
| VIT_00s0531g00030.t01 | Wine grape | cytosol | 16.41 | 39.39 |
| Zm00001d011855_P002 | Maize | cytosol | 51.01 | 19.22 |
Protein Annotations
| EntrezGene:100249811 | wikigene:100249811 | Gene3D:2.60.40.150 | Gene3D:3.30.40.160 | MapMan:35.1 | EMBL:AM483724 |
| InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf | InterPro:C2_dom | InterPro:C2_domain_sf | ProteinID:CAN79725 |
| ProteinID:CAN79725.1 | ProteinID:CCB62301 | ProteinID:CCB62301.1 | UniProt:F6I5T3 | EMBL:FN596752 | GO:GO:0003674 |
| GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 |
| InterPro:IPR000008 | InterPro:IPR001164 | InterPro:IPR035892 | InterPro:IPR038508 | EntrezGene:LOC100249811 | wikigene:LOC100249811 |
| PFAM:PF00168 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50004 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF390 | SMART:SM00105 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF57863 | UniParc:UPI0002109BE9 |
| ArrayExpress:VIT_13s0019g00350 | EnsemblPlantsGene:VIT_13s0019g00350 | EnsemblPlants:VIT_13s0019g00350.t01 | RefSeq:XP_002270290 | RefSeq:XP_002270290.1 | RefSeq:XP_019073274.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr13_random:-:2432992..2443174
Molecular Weight (calculated)
43962.2 Da
IEP (calculated)
6.187
GRAVY (calculated)
-0.492
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTRQDNTDS NNGSGTGSSL LDLLRSDIYW NCRKEGQTSS GPRGRLENLL CQSGNNICAD CGSPDPKWVS VSLGVFICIK CSGVHRSLGA HVSKVLSIKL
101: DEWTDEQVDT LTGMGGNSEA NMKYEASIPD YIRKPRPDSS TEERSDFIRR KYEMQQFFNS DEQMFCPFPP QGLCSPSSQG GSSSNQSGLP PEKKHYEKQT
201: TTHRLHGLGL AFRNSWRRKE PEHKPVKKSS SSAGMIEFVG LIKVNVVKGT NLAVRDVMTS DPYVLLALGQ QSVKTRVIKN NLNPVWNERL MLSIPEQIPP
301: LRVFVYDKDT FSTDDFMGEA EIDIQPLVSA AIAHENSTLN EPMEFGKLVA SKENTLVKDS VISLTDGKVM QDVSLKLQNV ERGVLEIELE CVPLSQ
101: DEWTDEQVDT LTGMGGNSEA NMKYEASIPD YIRKPRPDSS TEERSDFIRR KYEMQQFFNS DEQMFCPFPP QGLCSPSSQG GSSSNQSGLP PEKKHYEKQT
201: TTHRLHGLGL AFRNSWRRKE PEHKPVKKSS SSAGMIEFVG LIKVNVVKGT NLAVRDVMTS DPYVLLALGQ QSVKTRVIKN NLNPVWNERL MLSIPEQIPP
301: LRVFVYDKDT FSTDDFMGEA EIDIQPLVSA AIAHENSTLN EPMEFGKLVA SKENTLVKDS VISLTDGKVM QDVSLKLQNV ERGVLEIELE CVPLSQ
001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
Arabidopsis Description
AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.