Factsheet for Zm00001d011855_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0951100-01	Rice	cytosol	28.26	77.95
HORVU3Hr1G108480.1	Barley	cytosol	29.02	63.54
TraesCS3B01G548000.1	Wheat	cytosol	28.73	63.45
TraesCS3D01G494100.1	Wheat	cytosol	28.64	61.55
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	19.89	60.23
GSMUA_Achr5P16180_001	Banana	cytosol	20.93	59.95
Zm00001d038063_P001	Maize	nucleus	21.41	58.44
CDY69110	Canola	cytosol	4.95	55.32
KRH30029	Soybean	cytosol	20.27	54.48
KRH13401	Soybean	cytosol	18.84	53.8
KRH20756	Soybean	cytosol	18.74	53.53
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	16.94	53.13
AT3G07940.1	Thale cress	cytosol	19.41	52.99
Solyc08g043140.2.1	Tomato	cytosol	19.6	52.15
CDY22145	Canola	cytosol	18.93	51.96
PGSC0003DMT400068533	Potato	cytosol	19.51	51.9
CDX74022	Canola	cytosol	18.74	51.3
Bra001277.1-P	Field mustard	cytosol	18.65	51.04
VIT_13s0019g00350.t01	Wine grape	cytosol	19.22	51.01
CDY28007	Canola	cytosol	18.93	49.01
CDY35974	Canola	cytosol	18.84	48.77
Bra029688.1-P	Field mustard	cytosol	18.84	48.77
KRH62915	Soybean	cytosol	16.18	48.43
Zm00001d015804_P005	Maize	cytosol, mitochondrion	14.37	46.89
Zm00001d017881_P001	Maize	cytosol	13.8	43.67
Zm00001d034981_P001	Maize	cytosol	7.8	42.93
Zm00001d011396_P001	Maize	cytosol	6.95	41.48
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	12.46	38.53
Zm00001d044179_P001	Maize	cytosol	7.04	36.82
Zm00001d006447_P001	Maize	mitochondrion	5.52	34.94
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	5.04	34.87
Zm00001d019836_P003	Maize	cytosol	5.8	32.45
Zm00001d036830_P005	Maize	plastid	15.7	28.01
Zm00001d005398_P001	Maize	cytosol	9.42	27.5
Zm00001d007340_P001	Maize	cytosol	9.32	26.42
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	5.04	24.42

Protein Annotations

KEGG:00240+2.4.2.10	KEGG:00240+4.1.1.23	KEGG:00983+2.4.2.10	EntrezGene:100274407	EntrezGene:100381421	Gene3D:2.60.40.150
MapMan:22.3.4.3	Gene3D:3.20.20.70	Gene3D:3.30.40.160	Gene3D:3.40.50.2020	MapMan:6.2.1.5	UniProt:A0A1D6G4I8
ProteinID:AQK98208.1	InterPro:ARFGAP/RecO	InterPro:Aldolase_TIM	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004588	GO:GO:0004590	GO:GO:0005096
GO:GO:0005488	GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	GO:GO:0030234	GO:GO:0043547
GO:GO:0044205	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR013785	InterPro:IPR035892
InterPro:IPR038508	HAMAP:MF_01208	InterPro:OMPdeCOase_dom	InterPro:OMPdecase	InterPro:OMPdecase_AS	InterPro:OPRT
InterPro:Or_phspho_trans_dom	PFAM:PF00156	PFAM:PF00168	PFAM:PF00215	PFAM:PF01412	PRINTS:PR00405
InterPro:PRTase-like	InterPro:PRibTrfase_dom	ScanProsite:PS00156	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR19278
PANTHER:PTHR19278:SF39	InterPro:RibuloseP-bd_barrel	SMART:SM00105	SMART:SM00239	SMART:SM00934	SUPFAM:SSF49562
SUPFAM:SSF51366	SUPFAM:SSF53271	SUPFAM:SSF57863	TIGRFAMs:TIGR00336	TIGRFAMs:TIGR01740	UniParc:UPI000842D6CF
EnsemblPlantsGene:Zm00001d011855	EnsemblPlants:Zm00001d011855_P002	EnsemblPlants:Zm00001d011855_T002	SEG:seg	:	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD11

Coordinates

chr8:-:162939768..162950018

Molecular Weight (calculated)

115349.0 Da

IEP (calculated)

8.277

GRAVY (calculated)

-0.278

Length

1051 amino acids

Sequence
(BLAST)

0001: MEGRNPVQRF VDSPKPYNRR KARGMQTRMD SSDHGDRQGP RACEELPGKM DNDRADRQRL KACEFPAKMD NNHADRQVSK ACESKGNACE LPGKMDNDHP
0101: VRQGLKARGL LQPKSDASED GVCEGLKACG LTANKMDATD QCDHKGSKVC RVVTTKTDTS DQGDCQTFKV CGIAAKMDVN DHADHQGSKA SGMPTKTDAN
0201: DQCSNQGFVT CTAHIPILLP LVNCPFKTAE RLDHLLNQPA NRYCADCGAP DPKWVSMTFG VFICIKCSGA HRSLGVHISK ARHVVSVKLD EWADEQVDIL
0301: ADSGGNAAVN MIYEAFVPEN YAKPRQDCSA EERNDFIRRK YEAQQFLTNP QLSCPPRRNE KHNHQQHSTS SSRHGLGHSF RNSWRRKEHE AKSTKKTIEV
0401: GMVEFVGLIK IDIIRGTNLA IRDVMSSDPY VIINLGHQTM KTKVVKSSLN PVWNERLMLS IPDPVPLLKL QVYDKDTFTT DDRMGEAEIN IQPLVAAAKA
0501: HETSAIADTA QLNKWLAKDG IWIPRDSAIS IVNGKVKQVV NARLQNVERG QLEMELDHLN RCKYLLGMTI LCCILAMDAA ALESLILDLH AIEVVKLGSF
0601: TLKSGIKSPI YLDLRALVSH PRLLSAVASL LHALPATRPY GLVCGVPYTA LPIAAVLSVD RSIPMLMRRK EVKAHGTAKS IEGSFSPGDT VLIIEDLVTS
0701: GASVLETAAP LRAEGLVVAD AVVVVDREQG GRENLAANGI TLHSLMTLTE VLAVLLKHGK VTEEKAQEVR QFLDANRKVA VPGAAPVTPR VLRKTFSERA
0801: NLATNPMGKK LFELMETKQT NLFSYRKLFT SGCAAGCLQV GPQICMLKTH VDILSDFTPD FGSKLRSIAE KHNFLIFEDR KFADIGNTVT MQYEGGIFRI
0901: LDWADIVNAH IVPGPGIVDG LKLKGLPKGR GLLLLAEMSS AGNLAHGDYT AAAVKIAEQH SDFVMGFISV NPESWSVKPS SPAFIHATPG VQMVAGGDDL
1001: GQQYNTPESV INYRGSDIII VGRGIIKASD PMKKAWEYRL QGWQAYKNSL L

Best Arabidopsis Sequence Match ( AT3G54470.1 )
(BLAST)

001: MSAMEALILQ LHEIGAVKFG NFKLKSGIFS PVYIDLRLIV SYPSLLTQIS QTLISSLPPS ATFDVVCGVP YTALPIATVV SVSNGIPMLM RRKEIKDYGT
101: SKAIEGIFEK DQTCLIIEDL VTSGASVLET AAPLRAVGLK VSDAVVLIDR QQGGRENLAE NGIKLHSMIM LTDMVRVLKE KGKIEVEVEV NLLKFLEENR
201: RVSVPSVEKP KPKPRVLGFK ERSELSKNPT GKKLFDIMLK KETNLCLAAD VGTAAELLDI ADKVGPEICL LKTHVDILPD FTPDFGSKLR AIADKHKFLI
301: FEDRKFADIG NTVTMQYEGG IFKILEWADI INAHVISGPG IVDGLKLKGM PRGRGLLLLA EMSSAGNLAT GDYTAAAVKI ADAHSDFVMG FISVNPASWK
401: CGYVYPSMIH ATPGVQMVKG GDALGQQYNT PHSVITERGS DIIIVGRGII KAENPAETAH EYRVQGWNAY LEKCSQ

Arabidopsis Description

PYRE-FUridine 5'-monophosphate synthase [Source:UniProtKB/Swiss-Prot;Acc:Q42586]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.