Factsheet for Zm00001d015804_P005

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29722	Sorghum	cytosol	90.37	92.97
Os02t0198300-02	Rice	plasma membrane	84.78	85.31
HORVU6Hr1G032940.1	Barley	cytosol	83.23	82.97
TraesCS6A01G160700.1	Wheat	cytosol	82.92	82.66
TraesCS6B01G190600.1	Wheat	cytosol	82.3	82.04
TraesCS6D01G152000.1	Wheat	cytosol	83.85	79.18
GSMUA_Achr4P03900_001	Banana	cytosol	70.5	68.58
GSMUA_Achr9P22350_001	Banana	cytosol	70.5	68.17
Zm00001d017881_P001	Maize	cytosol	63.35	61.45
Zm00001d034981_P001	Maize	cytosol	34.47	58.12
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	57.14	54.12
Zm00001d036830_P005	Maize	plastid	73.91	40.41
Zm00001d038063_P001	Maize	nucleus	47.2	39.48
Zm00001d005398_P001	Maize	cytosol	44.1	39.44
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	18.32	38.82
Zm00001d006447_P001	Maize	mitochondrion	19.57	37.95
Zm00001d007340_P001	Maize	cytosol	42.24	36.66
Zm00001d011396_P001	Maize	cytosol	19.88	36.36
Zm00001d019836_P003	Maize	cytosol	19.25	32.98
Zm00001d044179_P001	Maize	cytosol	19.25	30.85
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	17.39	25.81
Zm00001d011855_P002	Maize	cytosol	46.89	14.37

Protein Annotations

EntrezGene:100382772	Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	ProteinID:AQK69563.1	ProteinID:AQK69564.1
ProteinID:AQK69569.1	ProteinID:AQK69570.1	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	EMBL:BT065296
UniProt:C0PAH7	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164
InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245	SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF57863	UniParc:UPI000194B116	EnsemblPlantsGene:Zm00001d015804	EnsemblPlants:Zm00001d015804_P005	EnsemblPlants:Zm00001d015804_T005	:

Description

ADP-ribosylation factor GTPase-activating protein AGD12

Coordinates

chr5:-:121512285..121515418

Molecular Weight (calculated)

35067.7 Da

IEP (calculated)

5.090

GRAVY (calculated)

-0.308

Length

322 amino acids

Sequence
(BLAST)

001: MSGHGDTATS AKMAKLKELL QKSENHICAD CGASDPKWAS ANIGVFICVK CSGVHRSLGT HISKVLSVTL DKWSDSEVDS MIEVGGNSQA NAIYEAFIPE
101: GYQKPHSDST QEEREKFIRS KYELQEFLKP SLRIVSHQPS DSGKHAGNAS HSDGSKSQVG MIEFIGILNV KVIGGTNLAI RDMSSSDPYV VLTLGQQKAQ
201: TSVINGNLNP VWNEELKLSV PQQYGPLKLQ VFDHDMVSKD DLMGEAEIDL QTMINAAAAF GDPELLGDIQ IGRWLKSEDN ALVRDSAVVV SGGKVKQGMA
301: LKLQHTESGE LELEMEWMPL NV

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.