Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040041.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 87.47 | 100.0 |
| AT3G07940.1 | Thale cress | cytosol | 88.77 | 88.31 |
| CDX74022 | Canola | cytosol | 83.55 | 83.33 |
| CDY28007 | Canola | cytosol | 87.99 | 83.0 |
| CDY35974 | Canola | cytosol | 87.73 | 82.76 |
| CDY69110 | Canola | cytosol | 18.02 | 73.4 |
| KRH30029 | Soybean | cytosol | 67.36 | 65.98 |
| KRH20756 | Soybean | cytosol | 62.4 | 64.95 |
| KRH13401 | Soybean | cytosol | 62.14 | 64.67 |
| GSMUA_Achr5P16180_001 | Banana | cytosol | 59.53 | 62.13 |
| VIT_13s0019g00350.t01 | Wine grape | cytosol | 63.71 | 61.62 |
| Solyc08g043140.2.1 | Tomato | cytosol | 63.19 | 61.27 |
| PGSC0003DMT400068533 | Potato | cytosol | 62.92 | 61.01 |
| GSMUA_Achr8P09660_001 | Banana | cytosol, plastid | 54.31 | 59.94 |
| KRH62915 | Soybean | cytosol | 53.0 | 57.83 |
| TraesCS1B01G251400.1 | Wheat | cytosol | 35.77 | 55.47 |
| Os01t0951100-01 | Rice | cytosol | 54.57 | 54.86 |
| EES18146 | Sorghum | cytosol | 54.57 | 54.29 |
| Zm00001d038063_P001 | Maize | nucleus | 53.26 | 52.99 |
| TraesCS1A01G239200.1 | Wheat | cytosol | 51.7 | 52.8 |
| TraesCS1D01G239400.3 | Wheat | cytosol | 51.7 | 52.38 |
| CDX82807 | Canola | cytosol | 42.3 | 51.27 |
| CDX76421 | Canola | cytosol | 43.34 | 50.46 |
| Os05t0382000-01 | Rice | cytosol | 51.96 | 50.38 |
| CDY21329 | Canola | mitochondrion | 43.6 | 49.55 |
| CDY62002 | Canola | mitochondrion | 43.34 | 49.26 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 43.08 | 48.82 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 43.86 | 48.7 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 42.82 | 48.24 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 42.56 | 48.22 |
| HORVU1Hr1G057260.3 | Barley | cytosol | 50.65 | 47.43 |
| CDY65341 | Canola | plastid | 43.86 | 45.28 |
| TraesCS3B01G548000.1 | Wheat | cytosol | 53.52 | 43.07 |
| HORVU3Hr1G108480.1 | Barley | cytosol | 53.79 | 42.92 |
| TraesCS3D01G494100.1 | Wheat | cytosol | 52.74 | 41.31 |
| CDY27005 | Canola | cytosol | 18.02 | 41.07 |
| CDY38572 | Canola | mitochondrion | 18.02 | 41.07 |
| CDY01709 | Canola | mitochondrion | 17.75 | 40.48 |
| CDY47746 | Canola | mitochondrion | 17.49 | 39.88 |
| CDX82060 | Canola | mitochondrion | 17.49 | 39.88 |
| CDY11544 | Canola | cytosol | 19.06 | 39.46 |
| CDY07499 | Canola | cytosol | 18.02 | 39.43 |
| CDX96152 | Canola | cytosol | 18.02 | 39.43 |
| CDX96279 | Canola | cytosol | 16.97 | 39.39 |
| CDY11543 | Canola | cytosol | 16.97 | 39.39 |
| CDX96278 | Canola | cytosol | 18.8 | 38.92 |
| CDY16452 | Canola | mitochondrion | 17.23 | 38.82 |
| CDY71117 | Canola | cytosol | 16.19 | 38.75 |
| CDX99693 | Canola | cytosol | 16.97 | 38.69 |
| CDY23479 | Canola | cytosol | 18.54 | 38.38 |
| CDX74562 | Canola | cytosol | 16.71 | 38.32 |
| CDX77307 | Canola | mitochondrion | 16.97 | 38.24 |
| CDX74561 | Canola | mitochondrion | 16.45 | 37.5 |
| CDY04742 | Canola | cytosol | 15.67 | 37.5 |
| CDY71433 | Canola | cytosol | 15.67 | 37.5 |
| CDY27654 | Canola | cytosol | 17.49 | 37.43 |
| CDY70365 | Canola | cytosol | 17.49 | 37.22 |
| CDY04090 | Canola | cytosol | 17.23 | 36.67 |
| CDX75953 | Canola | cytosol | 16.71 | 36.16 |
| CDY51927 | Canola | cytosol | 16.71 | 36.16 |
| CDY09436 | Canola | cytosol | 16.45 | 35.0 |
| CDY48816 | Canola | cytosol | 16.45 | 35.0 |
| CDY58016 | Canola | cytosol | 16.19 | 34.44 |
| CDY17665 | Canola | cytosol | 15.93 | 33.89 |
| CDY40545 | Canola | endoplasmic reticulum, extracellular | 16.19 | 31.31 |
| CDY70119 | Canola | cytosol | 20.63 | 31.23 |
| CDY60369 | Canola | cytosol | 13.32 | 27.42 |
| CDY49631 | Canola | extracellular | 8.36 | 26.67 |
| CDY23477 | Canola | cytosol | 8.62 | 26.4 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 42.3 | 22.98 |
| CDY01706 | Canola | golgi, mitochondrion, plasma membrane, plastid | 13.58 | 22.03 |
| Zm00001d011855_P002 | Maize | cytosol | 51.96 | 18.93 |
| CDX68329 | Canola | cytosol | 6.79 | 18.84 |
| CDY23476 | Canola | cytosol | 0.52 | 1.69 |
Protein Annotations
| Gene3D:2.60.40.150 | Gene3D:3.30.40.160 | MapMan:35.1 | GO:A0A078G6Q1 | UniProt:A0A078G6Q1 | InterPro:ARFGAP/RecO |
| InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf | InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDY22145 | ProteinID:CDY22145 |
| ProteinID:CDY22145.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 |
| GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00018539001 | InterPro:IPR000008 | InterPro:IPR001164 | InterPro:IPR035892 |
| InterPro:IPR038508 | PFAM:PF00168 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50004 | PFscan:PS50115 |
| PANTHER:PTHR23180 | PANTHER:PTHR23180:SF390 | SMART:SM00105 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF57863 |
| UniParc:UPI0004EF2B0E | : | : | : | : | : |
Description
BnaC01g39560DBnaC01g39560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6Q1]
Coordinates
chrLK032128:+:110863..113345
Molecular Weight (calculated)
42979.1 Da
IEP (calculated)
5.866
GRAVY (calculated)
-0.493
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGQEHDNP FEVSGSHACL YDLLCLETSN ETLENDFQTS SSDPRDRLEK LLKQPANKYC ADCGSPEPKW VSLSLGVFIC IKCSGVHRSL GVHITKVLSV
101: KLDDWTDDQV DMLAEYGGNT VVNQRFEACN IDHLKKPKPD SNNDERNDFI RKKYELHQFM DPKDCALCPY QQPSKINDST PSLCSANHRS TKNRIGNAFR
201: NSWGRRESDH KGHKKSNSLA GMIEFVGLIK VNVVKGTNLA VRDVMTSDPY VILTLGQQSV KTRVIKNNLN PVWNETLMLS IPEQMPPLKV LVYDKDTFST
301: DDFMGEAEID IQPLVSAAKA YETSSIKEPM QLGSWVASKE NTLVSDGIIS QEEGKVKQDI SLRLQKVERG VLEIQLECVP LTQ
101: KLDDWTDDQV DMLAEYGGNT VVNQRFEACN IDHLKKPKPD SNNDERNDFI RKKYELHQFM DPKDCALCPY QQPSKINDST PSLCSANHRS TKNRIGNAFR
201: NSWGRRESDH KGHKKSNSLA GMIEFVGLIK VNVVKGTNLA VRDVMTSDPY VILTLGQQSV KTRVIKNNLN PVWNETLMLS IPEQMPPLKV LVYDKDTFST
301: DDFMGEAEID IQPLVSAAKA YETSSIKEPM QLGSWVASKE NTLVSDGIIS QEEGKVKQDI SLRLQKVERG VLEIQLECVP LTQ
001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
Arabidopsis Description
AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.