Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038836 | Potato | cytosol | 83.33 | 82.84 |
| VIT_00s0531g00030.t01 | Wine grape | cytosol | 69.05 | 70.3 |
| KRH36617 | Soybean | cytosol | 67.86 | 68.67 |
| KRH25661 | Soybean | cytosol | 26.79 | 68.18 |
| KRH11612 | Soybean | cytosol | 67.26 | 68.07 |
| KRH51202 | Soybean | cytosol | 63.1 | 63.86 |
| AT5G47710.1 | Thale cress | cytosol | 62.5 | 63.25 |
| GSMUA_Achr4P13040_001 | Banana | cytosol | 57.74 | 56.73 |
| CDY40545 | Canola | endoplasmic reticulum, extracellular | 62.5 | 53.03 |
| Os09t0251800-01 | Rice | cytosol, plasma membrane | 52.38 | 51.46 |
| TraesCS5B01G166000.1 | Wheat | cytosol | 52.38 | 51.46 |
| TraesCS5A01G169300.1 | Wheat | cytosol | 52.38 | 51.46 |
| TraesCS5D01G173700.1 | Wheat | cytosol | 51.19 | 50.29 |
| GSMUA_Achr2P05420_001 | Banana | cytosol | 44.64 | 49.67 |
| Zm00001d019836_P003 | Maize | cytosol | 52.98 | 47.34 |
| PGSC0003DMT400078786 | Potato | cytosol | 40.48 | 41.21 |
| HORVU5Hr1G052010.2 | Barley | cytosol | 52.98 | 39.38 |
| PGSC0003DMT400042134 | Potato | cytosol | 30.36 | 37.78 |
| PGSC0003DMT400074100 | Potato | cytosol | 36.9 | 37.58 |
| HORVU5Hr1G052030.1 | Barley | cytosol | 52.98 | 37.08 |
| PGSC0003DMT400037472 | Potato | cytosol | 37.5 | 34.81 |
| PGSC0003DMT400020051 | Potato | cytosol | 33.33 | 34.15 |
| PGSC0003DMT400059720 | Potato | cytosol | 32.74 | 32.93 |
| PGSC0003DMT400068533 | Potato | cytosol | 38.1 | 16.2 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400034618 | EnsemblPlantsGene:PGSC0003DMG401013304 | EntrezGene:102583870 | InterPro:C2_dom | InterPro:IPR000008 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF245 | PFAM:PF00168 | PFscan:PS50004 | PGSC:PGSC0003DMG401013304 | PRINTS:PR00360 | RefSeq:XP_006352317.1 |
| SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0002952192 | UniProt:M1B108 | MapMan:35.1 | : |
Description
ARF GTPase activator [Source:PGSC_GENE;Acc:PGSC0003DMG401013304]
Coordinates
chr11:-:162093..165745
Molecular Weight (calculated)
18683.6 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.126
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDKFGQVKV MVVQGRRLVI RDFKSSDPYV ILKLGNQTAK TKVINSCLNP VWNEEFHFSI SEHAQVLKLQ VFDKDHFKAD DKMGNAHLSL QPLVASARLR
101: KILGVTAEGT TLRKVIPESD NCLAADSSIN WVNGEVVQDV WLRLCDVDSG DIELKIKLIN LPSAAPSK
101: KILGVTAEGT TLRKVIPESD NCLAADSSIN WVNGEVVQDV WLRLCDVDSG DIELKIKLIN LPSAAPSK
001: MGEPLGLLQV TVIQGKKLVI RDFKSSDPYV IVKLGNESAK TKVINNCLNP VWNEELNFTL KDPAAVLALE VFDKDRFKAD DKMGHASLSL QPLISVARLR
101: HVVRVSSGET TLRKVLPDPE NCVSRESTIS CIDGEVVQSV WLRLCAVESG EIELKIKLID PPGTNK
101: HVVRVSSGET TLRKVLPDPE NCVSRESTIS CIDGEVVQSV WLRLCAVESG EIELKIKLID PPGTNK
Arabidopsis Description
CAR11Protein C2-DOMAIN ABA-RELATED 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.